Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35203 | 105832;105833;105834 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
N2AB | 33562 | 100909;100910;100911 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
N2A | 32635 | 98128;98129;98130 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
N2B | 26138 | 78637;78638;78639 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
Novex-1 | 26263 | 79012;79013;79014 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
Novex-2 | 26330 | 79213;79214;79215 | chr2:178531008;178531007;178531006 | chr2:179395735;179395734;179395733 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs771136390 | -2.418 | 0.316 | N | 0.323 | 0.274 | None | gnomAD-2.1.1 | 4.28E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.35E-05 | 0 |
V/A | rs771136390 | -2.418 | 0.316 | N | 0.323 | 0.274 | None | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.02965E-04 | 0 | 0 |
V/A | rs771136390 | -2.418 | 0.316 | N | 0.323 | 0.274 | None | gnomAD-4.0.0 | 6.50725E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.13664E-05 | 0 | 1.44088E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4248 | ambiguous | 0.4509 | ambiguous | -2.279 | Highly Destabilizing | 0.316 | N | 0.323 | neutral | N | 0.454915687 | None | None | N |
V/C | 0.9572 | likely_pathogenic | 0.9459 | pathogenic | -2.193 | Highly Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/D | 0.9953 | likely_pathogenic | 0.9965 | pathogenic | -3.406 | Highly Destabilizing | 0.997 | D | 0.865 | deleterious | None | None | None | None | N |
V/E | 0.9804 | likely_pathogenic | 0.9856 | pathogenic | -3.247 | Highly Destabilizing | 0.996 | D | 0.837 | deleterious | D | 0.549562471 | None | None | N |
V/F | 0.8791 | likely_pathogenic | 0.8824 | pathogenic | -1.143 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
V/G | 0.8159 | likely_pathogenic | 0.8455 | pathogenic | -2.685 | Highly Destabilizing | 0.992 | D | 0.795 | deleterious | N | 0.508327532 | None | None | N |
V/H | 0.997 | likely_pathogenic | 0.9976 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.1533 | likely_benign | 0.1436 | benign | -1.15 | Destabilizing | 0.966 | D | 0.559 | neutral | N | 0.500196776 | None | None | N |
V/K | 0.9909 | likely_pathogenic | 0.9934 | pathogenic | -1.89 | Destabilizing | 0.997 | D | 0.844 | deleterious | None | None | None | None | N |
V/L | 0.6941 | likely_pathogenic | 0.6668 | pathogenic | -1.15 | Destabilizing | 0.934 | D | 0.631 | neutral | N | 0.491918344 | None | None | N |
V/M | 0.6636 | likely_pathogenic | 0.6624 | pathogenic | -1.509 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
V/N | 0.99 | likely_pathogenic | 0.991 | pathogenic | -2.226 | Highly Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
V/P | 0.9936 | likely_pathogenic | 0.9958 | pathogenic | -1.505 | Destabilizing | 0.997 | D | 0.854 | deleterious | None | None | None | None | N |
V/Q | 0.9795 | likely_pathogenic | 0.9841 | pathogenic | -2.171 | Highly Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
V/R | 0.9781 | likely_pathogenic | 0.9839 | pathogenic | -1.552 | Destabilizing | 0.997 | D | 0.87 | deleterious | None | None | None | None | N |
V/S | 0.8526 | likely_pathogenic | 0.8654 | pathogenic | -2.659 | Highly Destabilizing | 0.988 | D | 0.799 | deleterious | None | None | None | None | N |
V/T | 0.6308 | likely_pathogenic | 0.6347 | pathogenic | -2.396 | Highly Destabilizing | 0.979 | D | 0.651 | neutral | None | None | None | None | N |
V/W | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/Y | 0.991 | likely_pathogenic | 0.9922 | pathogenic | -1.35 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.