Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35204 | 105835;105836;105837 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
N2AB | 33563 | 100912;100913;100914 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
N2A | 32636 | 98131;98132;98133 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
N2B | 26139 | 78640;78641;78642 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
Novex-1 | 26264 | 79015;79016;79017 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
Novex-2 | 26331 | 79216;79217;79218 | chr2:178531005;178531004;178531003 | chr2:179395732;179395731;179395730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1474470920 | -0.912 | 0.986 | N | 0.533 | 0.172 | 0.391930172978 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
E/D | rs1474470920 | -0.912 | 0.986 | N | 0.533 | 0.172 | 0.391930172978 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
E/Q | None | None | 0.999 | N | 0.698 | 0.234 | 0.442160178816 | gnomAD-4.0.0 | 1.59092E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85749E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2137 | likely_benign | 0.2225 | benign | -0.56 | Destabilizing | 0.972 | D | 0.639 | neutral | D | 0.523919986 | None | None | N |
E/C | 0.8908 | likely_pathogenic | 0.913 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/D | 0.4245 | ambiguous | 0.42 | ambiguous | -1.058 | Destabilizing | 0.986 | D | 0.533 | neutral | N | 0.51976496 | None | None | N |
E/F | 0.8824 | likely_pathogenic | 0.8915 | pathogenic | -0.707 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/G | 0.2763 | likely_benign | 0.2891 | benign | -0.849 | Destabilizing | 0.097 | N | 0.458 | neutral | D | 0.522978623 | None | None | N |
E/H | 0.6 | likely_pathogenic | 0.6129 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/I | 0.626 | likely_pathogenic | 0.6351 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
E/K | 0.1712 | likely_benign | 0.2049 | benign | -0.245 | Destabilizing | 0.986 | D | 0.685 | prob.neutral | N | 0.484014803 | None | None | N |
E/L | 0.6544 | likely_pathogenic | 0.6762 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.5947 | likely_pathogenic | 0.6228 | pathogenic | 0.615 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
E/N | 0.5005 | ambiguous | 0.5096 | ambiguous | -0.489 | Destabilizing | 0.997 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/P | 0.9854 | likely_pathogenic | 0.9884 | pathogenic | -0.033 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
E/Q | 0.1371 | likely_benign | 0.1401 | benign | -0.445 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | N | 0.517628732 | None | None | N |
E/R | 0.2813 | likely_benign | 0.3211 | benign | -0.254 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/S | 0.2646 | likely_benign | 0.2697 | benign | -0.786 | Destabilizing | 0.979 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/T | 0.2781 | likely_benign | 0.2864 | benign | -0.547 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/V | 0.4062 | ambiguous | 0.397 | ambiguous | -0.033 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.520669037 | None | None | N |
E/W | 0.9296 | likely_pathogenic | 0.9442 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/Y | 0.8229 | likely_pathogenic | 0.8332 | pathogenic | -0.479 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.