Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35209 | 105850;105851;105852 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
N2AB | 33568 | 100927;100928;100929 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
N2A | 32641 | 98146;98147;98148 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
N2B | 26144 | 78655;78656;78657 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
Novex-1 | 26269 | 79030;79031;79032 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
Novex-2 | 26336 | 79231;79232;79233 | chr2:178530990;178530989;178530988 | chr2:179395717;179395716;179395715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs56365812 | 0.167 | 0.025 | N | 0.489 | 0.133 | 0.207176502487 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.66889E-04 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs56365812 | 0.167 | 0.025 | N | 0.489 | 0.133 | 0.207176502487 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 5.76923E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs56365812 | 0.167 | 0.025 | N | 0.489 | 0.133 | 0.207176502487 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
K/Q | rs56365812 | 0.167 | 0.025 | N | 0.489 | 0.133 | 0.207176502487 | gnomAD-4.0.0 | 4.95663E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.33666E-04 | None | 0 | 0 | 0 | 0 | 3.20061E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3049 | likely_benign | 0.3845 | ambiguous | -0.141 | Destabilizing | 0.014 | N | 0.494 | neutral | None | None | None | None | N |
K/C | 0.5549 | ambiguous | 0.6295 | pathogenic | -0.34 | Destabilizing | 0.646 | D | 0.577 | neutral | None | None | None | None | N |
K/D | 0.6711 | likely_pathogenic | 0.7447 | pathogenic | -0.011 | Destabilizing | 0.064 | N | 0.503 | neutral | None | None | None | None | N |
K/E | 0.1832 | likely_benign | 0.2169 | benign | 0.04 | Stabilizing | 0.025 | N | 0.446 | neutral | N | 0.381370438 | None | None | N |
K/F | 0.6473 | likely_pathogenic | 0.7067 | pathogenic | -0.052 | Destabilizing | 0.326 | N | 0.573 | neutral | None | None | None | None | N |
K/G | 0.4402 | ambiguous | 0.5305 | ambiguous | -0.427 | Destabilizing | 0.064 | N | 0.545 | neutral | None | None | None | None | N |
K/H | 0.2933 | likely_benign | 0.3231 | benign | -0.712 | Destabilizing | 0.326 | N | 0.519 | neutral | None | None | None | None | N |
K/I | 0.25 | likely_benign | 0.3113 | benign | 0.558 | Stabilizing | 0.083 | N | 0.575 | neutral | N | 0.507107881 | None | None | N |
K/L | 0.2631 | likely_benign | 0.3441 | ambiguous | 0.558 | Stabilizing | 0.033 | N | 0.551 | neutral | None | None | None | None | N |
K/M | 0.1735 | likely_benign | 0.2258 | benign | 0.291 | Stabilizing | 0.326 | N | 0.518 | neutral | None | None | None | None | N |
K/N | 0.3876 | ambiguous | 0.4639 | ambiguous | -0.057 | Destabilizing | 0.049 | N | 0.453 | neutral | N | 0.478401127 | None | None | N |
K/P | 0.7944 | likely_pathogenic | 0.9049 | pathogenic | 0.356 | Stabilizing | 0.326 | N | 0.513 | neutral | None | None | None | None | N |
K/Q | 0.1192 | likely_benign | 0.1312 | benign | -0.191 | Destabilizing | 0.025 | N | 0.489 | neutral | N | 0.474686031 | None | None | N |
K/R | 0.0677 | likely_benign | 0.0728 | benign | -0.291 | Destabilizing | None | N | 0.146 | neutral | N | 0.429031099 | None | None | N |
K/S | 0.3205 | likely_benign | 0.3935 | ambiguous | -0.593 | Destabilizing | 0.033 | N | 0.411 | neutral | None | None | None | None | N |
K/T | 0.1053 | likely_benign | 0.143 | benign | -0.368 | Destabilizing | None | N | 0.295 | neutral | N | 0.45956465 | None | None | N |
K/V | 0.2497 | likely_benign | 0.3061 | benign | 0.356 | Stabilizing | 0.033 | N | 0.538 | neutral | None | None | None | None | N |
K/W | 0.6281 | likely_pathogenic | 0.6872 | pathogenic | 0.004 | Stabilizing | 0.848 | D | 0.635 | neutral | None | None | None | None | N |
K/Y | 0.5412 | ambiguous | 0.6089 | pathogenic | 0.31 | Stabilizing | 0.326 | N | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.