Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35213 | 105862;105863;105864 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
N2AB | 33572 | 100939;100940;100941 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
N2A | 32645 | 98158;98159;98160 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
N2B | 26148 | 78667;78668;78669 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
Novex-1 | 26273 | 79042;79043;79044 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
Novex-2 | 26340 | 79243;79244;79245 | chr2:178530978;178530977;178530976 | chr2:179395705;179395704;179395703 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs748652325 | -1.233 | None | N | 0.206 | 0.127 | 0.291694819147 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/A | rs748652325 | -1.233 | None | N | 0.206 | 0.127 | 0.291694819147 | gnomAD-4.0.0 | 4.10482E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69817E-06 | 3.47794E-05 | 0 |
E/K | None | None | None | N | 0.164 | 0.099 | 0.184867976434 | gnomAD-4.0.0 | 3.18176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54477E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1104 | likely_benign | 0.1116 | benign | -0.538 | Destabilizing | None | N | 0.206 | neutral | N | 0.465026398 | None | None | N |
E/C | 0.7078 | likely_pathogenic | 0.725 | pathogenic | -0.081 | Destabilizing | 0.116 | N | 0.589 | neutral | None | None | None | None | N |
E/D | 0.1772 | likely_benign | 0.1641 | benign | -0.481 | Destabilizing | 0.001 | N | 0.172 | neutral | N | 0.444285766 | None | None | N |
E/F | 0.594 | likely_pathogenic | 0.5962 | pathogenic | -0.366 | Destabilizing | 0.008 | N | 0.388 | neutral | None | None | None | None | N |
E/G | 0.1398 | likely_benign | 0.1459 | benign | -0.769 | Destabilizing | 0.001 | N | 0.298 | neutral | N | 0.515185859 | None | None | N |
E/H | 0.2249 | likely_benign | 0.2037 | benign | -0.273 | Destabilizing | None | N | 0.129 | neutral | None | None | None | None | N |
E/I | 0.2624 | likely_benign | 0.2569 | benign | 0.051 | Stabilizing | 0.008 | N | 0.371 | neutral | None | None | None | None | N |
E/K | 0.0954 | likely_benign | 0.0926 | benign | 0.138 | Stabilizing | None | N | 0.164 | neutral | N | 0.49732803 | None | None | N |
E/L | 0.2095 | likely_benign | 0.1997 | benign | 0.051 | Stabilizing | 0.001 | N | 0.364 | neutral | None | None | None | None | N |
E/M | 0.3303 | likely_benign | 0.3298 | benign | 0.254 | Stabilizing | 0.041 | N | 0.504 | neutral | None | None | None | None | N |
E/N | 0.1878 | likely_benign | 0.1744 | benign | -0.167 | Destabilizing | 0.002 | N | 0.209 | neutral | None | None | None | None | N |
E/P | 0.3821 | ambiguous | 0.3354 | benign | -0.125 | Destabilizing | 0.003 | N | 0.321 | neutral | None | None | None | None | N |
E/Q | 0.0661 | likely_benign | 0.0626 | benign | -0.132 | Destabilizing | None | N | 0.101 | neutral | N | 0.491674282 | None | None | N |
E/R | 0.1347 | likely_benign | 0.1316 | benign | 0.359 | Stabilizing | 0.001 | N | 0.209 | neutral | None | None | None | None | N |
E/S | 0.1385 | likely_benign | 0.1336 | benign | -0.366 | Destabilizing | None | N | 0.164 | neutral | None | None | None | None | N |
E/T | 0.1324 | likely_benign | 0.1275 | benign | -0.181 | Destabilizing | 0.001 | N | 0.247 | neutral | None | None | None | None | N |
E/V | 0.171 | likely_benign | 0.1682 | benign | -0.125 | Destabilizing | 0.001 | N | 0.321 | neutral | N | 0.495157304 | None | None | N |
E/W | 0.7039 | likely_pathogenic | 0.7045 | pathogenic | -0.182 | Destabilizing | 0.316 | N | 0.544 | neutral | None | None | None | None | N |
E/Y | 0.4259 | ambiguous | 0.4149 | ambiguous | -0.116 | Destabilizing | 0.002 | N | 0.401 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.