Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35289 | 106090;106091;106092 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
N2AB | 33648 | 101167;101168;101169 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
N2A | 32721 | 98386;98387;98388 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
N2B | 26224 | 78895;78896;78897 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
Novex-1 | 26349 | 79270;79271;79272 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
Novex-2 | 26416 | 79471;79472;79473 | chr2:178530750;178530749;178530748 | chr2:179395477;179395476;179395475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1381430946 | -0.78 | None | N | 0.108 | 0.048 | 0.0666544352282 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1381430946 | -0.78 | None | N | 0.108 | 0.048 | 0.0666544352282 | gnomAD-4.0.0 | 3.18195E-06 | None | None | None | None | N | None | 0 | 4.57331E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0886 | likely_benign | 0.0942 | benign | -0.613 | Destabilizing | None | N | 0.108 | neutral | N | 0.44204336 | None | None | N |
T/C | 0.3384 | likely_benign | 0.3863 | ambiguous | -0.492 | Destabilizing | 0.177 | N | 0.337 | neutral | None | None | None | None | N |
T/D | 0.316 | likely_benign | 0.3493 | ambiguous | -0.071 | Destabilizing | 0.015 | N | 0.293 | neutral | None | None | None | None | N |
T/E | 0.2629 | likely_benign | 0.2823 | benign | -0.055 | Destabilizing | 0.006 | N | 0.265 | neutral | None | None | None | None | N |
T/F | 0.192 | likely_benign | 0.2084 | benign | -0.607 | Destabilizing | 0.029 | N | 0.381 | neutral | None | None | None | None | N |
T/G | 0.2149 | likely_benign | 0.2542 | benign | -0.88 | Destabilizing | 0.006 | N | 0.255 | neutral | None | None | None | None | N |
T/H | 0.2024 | likely_benign | 0.224 | benign | -1.104 | Destabilizing | 0.177 | N | 0.387 | neutral | None | None | None | None | N |
T/I | 0.1115 | likely_benign | 0.1149 | benign | 0.007 | Stabilizing | None | N | 0.137 | neutral | N | 0.412523907 | None | None | N |
T/K | 0.1706 | likely_benign | 0.1844 | benign | -0.712 | Destabilizing | None | N | 0.179 | neutral | None | None | None | None | N |
T/L | 0.0856 | likely_benign | 0.0915 | benign | 0.007 | Stabilizing | None | N | 0.137 | neutral | None | None | None | None | N |
T/M | 0.1014 | likely_benign | 0.1032 | benign | 0.03 | Stabilizing | 0.096 | N | 0.38 | neutral | None | None | None | None | N |
T/N | 0.1052 | likely_benign | 0.1163 | benign | -0.705 | Destabilizing | 0.011 | N | 0.205 | neutral | N | 0.48708038 | None | None | N |
T/P | 0.1379 | likely_benign | 0.171 | benign | -0.166 | Destabilizing | 0.022 | N | 0.344 | neutral | N | 0.443057318 | None | None | N |
T/Q | 0.1995 | likely_benign | 0.2169 | benign | -0.775 | Destabilizing | 0.029 | N | 0.355 | neutral | None | None | None | None | N |
T/R | 0.1371 | likely_benign | 0.1485 | benign | -0.523 | Destabilizing | 0.015 | N | 0.285 | neutral | None | None | None | None | N |
T/S | 0.0949 | likely_benign | 0.1064 | benign | -0.951 | Destabilizing | None | N | 0.164 | neutral | N | 0.460104423 | None | None | N |
T/V | 0.1205 | likely_benign | 0.1271 | benign | -0.166 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
T/W | 0.5265 | ambiguous | 0.5832 | pathogenic | -0.614 | Destabilizing | 0.712 | D | 0.418 | neutral | None | None | None | None | N |
T/Y | 0.2455 | likely_benign | 0.2684 | benign | -0.363 | Destabilizing | 0.177 | N | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.