Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35300 | 106123;106124;106125 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
N2AB | 33659 | 101200;101201;101202 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
N2A | 32732 | 98419;98420;98421 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
N2B | 26235 | 78928;78929;78930 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
Novex-1 | 26360 | 79303;79304;79305 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
Novex-2 | 26427 | 79504;79505;79506 | chr2:178530717;178530716;178530715 | chr2:179395444;179395443;179395442 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs769262485 | -0.339 | 0.045 | N | 0.286 | 0.08 | 0.0846915920261 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1792 | likely_benign | 0.1752 | benign | -1.594 | Destabilizing | 0.002 | N | 0.239 | neutral | None | None | None | None | N |
I/C | 0.6452 | likely_pathogenic | 0.6453 | pathogenic | -0.878 | Destabilizing | 0.112 | N | 0.303 | neutral | None | None | None | None | N |
I/D | 0.4511 | ambiguous | 0.4186 | ambiguous | -1.08 | Destabilizing | 0.017 | N | 0.407 | neutral | None | None | None | None | N |
I/E | 0.3224 | likely_benign | 0.306 | benign | -1.121 | Destabilizing | 0.004 | N | 0.345 | neutral | None | None | None | None | N |
I/F | 0.14 | likely_benign | 0.1376 | benign | -1.307 | Destabilizing | None | N | 0.122 | neutral | N | 0.489748697 | None | None | N |
I/G | 0.5092 | ambiguous | 0.4849 | ambiguous | -1.874 | Destabilizing | 0.007 | N | 0.373 | neutral | None | None | None | None | N |
I/H | 0.4011 | ambiguous | 0.3953 | ambiguous | -1.12 | Destabilizing | 0.112 | N | 0.383 | neutral | None | None | None | None | N |
I/K | 0.231 | likely_benign | 0.2185 | benign | -0.983 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
I/L | 0.1547 | likely_benign | 0.1507 | benign | -0.916 | Destabilizing | None | N | 0.086 | neutral | N | 0.484380163 | None | None | N |
I/M | 0.0819 | likely_benign | 0.0831 | benign | -0.595 | Destabilizing | 0.045 | N | 0.286 | neutral | N | 0.480590496 | None | None | N |
I/N | 0.1434 | likely_benign | 0.1326 | benign | -0.696 | Destabilizing | 0.013 | N | 0.437 | neutral | N | 0.441474748 | None | None | N |
I/P | 0.7839 | likely_pathogenic | 0.7123 | pathogenic | -1.11 | Destabilizing | 0.035 | N | 0.454 | neutral | None | None | None | None | N |
I/Q | 0.3246 | likely_benign | 0.3219 | benign | -0.959 | Destabilizing | 0.017 | N | 0.469 | neutral | None | None | None | None | N |
I/R | 0.1882 | likely_benign | 0.1778 | benign | -0.347 | Destabilizing | 0.009 | N | 0.411 | neutral | None | None | None | None | N |
I/S | 0.1742 | likely_benign | 0.166 | benign | -1.274 | Destabilizing | None | N | 0.153 | neutral | N | 0.39186986 | None | None | N |
I/T | 0.0811 | likely_benign | 0.0781 | benign | -1.207 | Destabilizing | None | N | 0.126 | neutral | N | 0.382386372 | None | None | N |
I/V | 0.0857 | likely_benign | 0.091 | benign | -1.11 | Destabilizing | None | N | 0.091 | neutral | N | 0.461137944 | None | None | N |
I/W | 0.6769 | likely_pathogenic | 0.6638 | pathogenic | -1.323 | Destabilizing | 0.278 | N | 0.359 | neutral | None | None | None | None | N |
I/Y | 0.386 | ambiguous | 0.3658 | ambiguous | -1.109 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.