Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35304 | 106135;106136;106137 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
N2AB | 33663 | 101212;101213;101214 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
N2A | 32736 | 98431;98432;98433 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
N2B | 26239 | 78940;78941;78942 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
Novex-1 | 26364 | 79315;79316;79317 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
Novex-2 | 26431 | 79516;79517;79518 | chr2:178530705;178530704;178530703 | chr2:179395432;179395431;179395430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.213 | N | 0.39 | 0.079 | 0.378148810121 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1198 | likely_benign | 0.1189 | benign | -1.043 | Destabilizing | 0.047 | N | 0.372 | neutral | D | 0.523111909 | None | None | N |
T/C | 0.4968 | ambiguous | 0.5533 | ambiguous | -0.819 | Destabilizing | 0.002 | N | 0.403 | neutral | None | None | None | None | N |
T/D | 0.5879 | likely_pathogenic | 0.5767 | pathogenic | -1.307 | Destabilizing | 0.418 | N | 0.457 | neutral | None | None | None | None | N |
T/E | 0.4506 | ambiguous | 0.4478 | ambiguous | -1.187 | Destabilizing | 0.228 | N | 0.435 | neutral | None | None | None | None | N |
T/F | 0.2766 | likely_benign | 0.2851 | benign | -0.757 | Destabilizing | 0.002 | N | 0.391 | neutral | None | None | None | None | N |
T/G | 0.3828 | ambiguous | 0.3952 | ambiguous | -1.411 | Destabilizing | 0.129 | N | 0.439 | neutral | None | None | None | None | N |
T/H | 0.2866 | likely_benign | 0.2931 | benign | -1.609 | Destabilizing | 0.002 | N | 0.465 | neutral | None | None | None | None | N |
T/I | 0.1695 | likely_benign | 0.1778 | benign | -0.111 | Destabilizing | 0.007 | N | 0.273 | neutral | N | 0.489241636 | None | None | N |
T/K | 0.2496 | likely_benign | 0.2409 | benign | -0.798 | Destabilizing | 0.418 | N | 0.455 | neutral | None | None | None | None | N |
T/L | 0.1419 | likely_benign | 0.1463 | benign | -0.111 | Destabilizing | 0.061 | N | 0.411 | neutral | None | None | None | None | N |
T/M | 0.1376 | likely_benign | 0.1377 | benign | 0.027 | Stabilizing | 0.836 | D | 0.514 | neutral | None | None | None | None | N |
T/N | 0.1744 | likely_benign | 0.1734 | benign | -1.194 | Destabilizing | 0.213 | N | 0.39 | neutral | N | 0.501408486 | None | None | N |
T/P | 0.5512 | ambiguous | 0.4855 | ambiguous | -0.389 | Destabilizing | 0.523 | D | 0.535 | neutral | N | 0.50987604 | None | None | N |
T/Q | 0.2882 | likely_benign | 0.286 | benign | -1.168 | Destabilizing | 0.418 | N | 0.579 | neutral | None | None | None | None | N |
T/R | 0.1897 | likely_benign | 0.1795 | benign | -0.779 | Destabilizing | 0.418 | N | 0.526 | neutral | None | None | None | None | N |
T/S | 0.1314 | likely_benign | 0.1349 | benign | -1.402 | Destabilizing | 0.001 | N | 0.193 | neutral | N | 0.472587088 | None | None | N |
T/V | 0.186 | likely_benign | 0.1973 | benign | -0.389 | Destabilizing | 0.129 | N | 0.365 | neutral | None | None | None | None | N |
T/W | 0.6932 | likely_pathogenic | 0.6951 | pathogenic | -0.82 | Destabilizing | 0.983 | D | 0.549 | neutral | None | None | None | None | N |
T/Y | 0.3633 | ambiguous | 0.3622 | ambiguous | -0.509 | Destabilizing | 0.264 | N | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.