Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35306 | 106141;106142;106143 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
N2AB | 33665 | 101218;101219;101220 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
N2A | 32738 | 98437;98438;98439 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
N2B | 26241 | 78946;78947;78948 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
Novex-1 | 26366 | 79321;79322;79323 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
Novex-2 | 26433 | 79522;79523;79524 | chr2:178530699;178530698;178530697 | chr2:179395426;179395425;179395424 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1434315858 | None | 0.074 | N | 0.535 | 0.075 | 0.523546030903 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1434315858 | None | 0.074 | N | 0.535 | 0.075 | 0.523546030903 | gnomAD-4.0.0 | 1.97135E-05 | None | None | None | None | N | None | 7.23973E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.052 | likely_benign | 0.0706 | benign | -1.368 | Destabilizing | None | N | 0.219 | neutral | N | 0.433855342 | None | None | N |
V/C | 0.4881 | ambiguous | 0.6036 | pathogenic | -1.245 | Destabilizing | 0.177 | N | 0.541 | neutral | None | None | None | None | N |
V/D | 0.1519 | likely_benign | 0.2061 | benign | -1.282 | Destabilizing | 0.029 | N | 0.595 | neutral | None | None | None | None | N |
V/E | 0.1218 | likely_benign | 0.1379 | benign | -1.3 | Destabilizing | 0.022 | N | 0.509 | neutral | N | 0.429486885 | None | None | N |
V/F | 0.1166 | likely_benign | 0.1406 | benign | -1.271 | Destabilizing | 0.096 | N | 0.569 | neutral | None | None | None | None | N |
V/G | 0.1073 | likely_benign | 0.1332 | benign | -1.634 | Destabilizing | 0.005 | N | 0.51 | neutral | N | 0.502139204 | None | None | N |
V/H | 0.2922 | likely_benign | 0.3359 | benign | -1.129 | Destabilizing | 0.712 | D | 0.581 | neutral | None | None | None | None | N |
V/I | 0.0754 | likely_benign | 0.084 | benign | -0.747 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
V/K | 0.1431 | likely_benign | 0.1348 | benign | -0.928 | Destabilizing | 0.029 | N | 0.514 | neutral | None | None | None | None | N |
V/L | 0.1202 | likely_benign | 0.1447 | benign | -0.747 | Destabilizing | None | N | 0.248 | neutral | N | 0.466045118 | None | None | N |
V/M | 0.0888 | likely_benign | 0.0862 | benign | -0.72 | Destabilizing | 0.074 | N | 0.535 | neutral | N | 0.494674514 | None | None | N |
V/N | 0.1136 | likely_benign | 0.146 | benign | -0.807 | Destabilizing | 0.096 | N | 0.61 | neutral | None | None | None | None | N |
V/P | 0.4165 | ambiguous | 0.5119 | ambiguous | -0.92 | Destabilizing | 0.096 | N | 0.568 | neutral | None | None | None | None | N |
V/Q | 0.1462 | likely_benign | 0.1481 | benign | -1.046 | Destabilizing | 0.177 | N | 0.556 | neutral | None | None | None | None | N |
V/R | 0.1192 | likely_benign | 0.112 | benign | -0.456 | Destabilizing | 0.096 | N | 0.612 | neutral | None | None | None | None | N |
V/S | 0.0691 | likely_benign | 0.0968 | benign | -1.34 | Destabilizing | None | N | 0.422 | neutral | None | None | None | None | N |
V/T | 0.0678 | likely_benign | 0.0837 | benign | -1.252 | Destabilizing | 0.006 | N | 0.409 | neutral | None | None | None | None | N |
V/W | 0.61 | likely_pathogenic | 0.6691 | pathogenic | -1.379 | Destabilizing | 0.712 | D | 0.621 | neutral | None | None | None | None | N |
V/Y | 0.3496 | ambiguous | 0.4102 | ambiguous | -1.048 | Destabilizing | 0.177 | N | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.