Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35308 | 106147;106148;106149 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
N2AB | 33667 | 101224;101225;101226 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
N2A | 32740 | 98443;98444;98445 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
N2B | 26243 | 78952;78953;78954 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
Novex-1 | 26368 | 79327;79328;79329 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
Novex-2 | 26435 | 79528;79529;79530 | chr2:178530693;178530692;178530691 | chr2:179395420;179395419;179395418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs754935594 | -0.836 | 0.089 | N | 0.559 | 0.161 | 0.191931220699 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1889 | likely_benign | 0.2121 | benign | -0.655 | Destabilizing | 0.089 | N | 0.559 | neutral | N | 0.445692331 | None | None | N |
E/C | 0.9118 | likely_pathogenic | 0.9253 | pathogenic | -0.035 | Destabilizing | 0.955 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/D | 0.116 | likely_benign | 0.1412 | benign | -0.525 | Destabilizing | 0.001 | N | 0.264 | neutral | N | 0.45296502 | None | None | N |
E/F | 0.8336 | likely_pathogenic | 0.8573 | pathogenic | -0.547 | Destabilizing | 0.955 | D | 0.76 | deleterious | None | None | None | None | N |
E/G | 0.1786 | likely_benign | 0.1975 | benign | -0.877 | Destabilizing | 0.163 | N | 0.643 | neutral | N | 0.491099334 | None | None | N |
E/H | 0.5601 | ambiguous | 0.6132 | pathogenic | -0.532 | Destabilizing | 0.774 | D | 0.588 | neutral | None | None | None | None | N |
E/I | 0.5874 | likely_pathogenic | 0.6186 | pathogenic | -0.094 | Destabilizing | 0.648 | D | 0.783 | deleterious | None | None | None | None | N |
E/K | 0.2053 | likely_benign | 0.2265 | benign | 0.23 | Stabilizing | 0.089 | N | 0.427 | neutral | N | 0.465816887 | None | None | N |
E/L | 0.5845 | likely_pathogenic | 0.6393 | pathogenic | -0.094 | Destabilizing | 0.476 | N | 0.763 | deleterious | None | None | None | None | N |
E/M | 0.6494 | likely_pathogenic | 0.6887 | pathogenic | 0.203 | Stabilizing | 0.874 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.2668 | likely_benign | 0.3093 | benign | -0.145 | Destabilizing | 0.313 | N | 0.573 | neutral | None | None | None | None | N |
E/P | 0.6326 | likely_pathogenic | 0.7248 | pathogenic | -0.261 | Destabilizing | 0.648 | D | 0.741 | deleterious | None | None | None | None | N |
E/Q | 0.184 | likely_benign | 0.2055 | benign | -0.112 | Destabilizing | 0.001 | N | 0.204 | neutral | N | 0.448289919 | None | None | N |
E/R | 0.3508 | ambiguous | 0.3859 | ambiguous | 0.339 | Stabilizing | 0.313 | N | 0.569 | neutral | None | None | None | None | N |
E/S | 0.2139 | likely_benign | 0.242 | benign | -0.302 | Destabilizing | 0.115 | N | 0.472 | neutral | None | None | None | None | N |
E/T | 0.2955 | likely_benign | 0.3353 | benign | -0.117 | Destabilizing | 0.476 | N | 0.706 | prob.neutral | None | None | None | None | N |
E/V | 0.3753 | ambiguous | 0.4085 | ambiguous | -0.261 | Destabilizing | 0.407 | N | 0.744 | deleterious | N | 0.477129959 | None | None | N |
E/W | 0.9366 | likely_pathogenic | 0.9473 | pathogenic | -0.356 | Destabilizing | 0.955 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Y | 0.7352 | likely_pathogenic | 0.7689 | pathogenic | -0.292 | Destabilizing | 0.648 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.