Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35318 | 106177;106178;106179 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
N2AB | 33677 | 101254;101255;101256 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
N2A | 32750 | 98473;98474;98475 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
N2B | 26253 | 78982;78983;78984 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
Novex-1 | 26378 | 79357;79358;79359 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
Novex-2 | 26445 | 79558;79559;79560 | chr2:178530663;178530662;178530661 | chr2:179395390;179395389;179395388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1391706140 | None | 0.029 | N | 0.459 | 0.095 | 0.229924730088 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1391706140 | None | 0.029 | N | 0.459 | 0.095 | 0.229924730088 | gnomAD-4.0.0 | 6.57505E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
T/S | rs1688710616 | None | None | N | 0.183 | 0.162 | 0.143124449307 | gnomAD-4.0.0 | 3.18173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.715E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0802 | likely_benign | 0.0808 | benign | -0.916 | Destabilizing | None | N | 0.133 | neutral | N | 0.49492523 | None | None | N |
T/C | 0.3974 | ambiguous | 0.3915 | ambiguous | -0.595 | Destabilizing | 0.356 | N | 0.527 | neutral | None | None | None | None | N |
T/D | 0.3849 | ambiguous | 0.3867 | ambiguous | -1.0 | Destabilizing | 0.072 | N | 0.484 | neutral | None | None | None | None | N |
T/E | 0.349 | ambiguous | 0.3551 | ambiguous | -0.86 | Destabilizing | 0.038 | N | 0.478 | neutral | None | None | None | None | N |
T/F | 0.225 | likely_benign | 0.2341 | benign | -0.531 | Destabilizing | 0.214 | N | 0.571 | neutral | None | None | None | None | N |
T/G | 0.3044 | likely_benign | 0.3026 | benign | -1.302 | Destabilizing | 0.016 | N | 0.46 | neutral | None | None | None | None | N |
T/H | 0.2853 | likely_benign | 0.2851 | benign | -1.46 | Destabilizing | 0.356 | N | 0.534 | neutral | None | None | None | None | N |
T/I | 0.133 | likely_benign | 0.1311 | benign | 0.073 | Stabilizing | 0.012 | N | 0.431 | neutral | D | 0.525941571 | None | None | N |
T/K | 0.2538 | likely_benign | 0.2505 | benign | -0.821 | Destabilizing | 0.038 | N | 0.48 | neutral | None | None | None | None | N |
T/L | 0.1154 | likely_benign | 0.1159 | benign | 0.073 | Stabilizing | None | N | 0.244 | neutral | None | None | None | None | N |
T/M | 0.1084 | likely_benign | 0.1132 | benign | 0.117 | Stabilizing | 0.214 | N | 0.533 | neutral | None | None | None | None | N |
T/N | 0.1374 | likely_benign | 0.1322 | benign | -1.222 | Destabilizing | 0.029 | N | 0.459 | neutral | N | 0.511510836 | None | None | N |
T/P | 0.524 | ambiguous | 0.5153 | ambiguous | -0.224 | Destabilizing | 0.055 | N | 0.522 | neutral | D | 0.524943167 | None | None | N |
T/Q | 0.2734 | likely_benign | 0.2777 | benign | -1.068 | Destabilizing | 0.214 | N | 0.551 | neutral | None | None | None | None | N |
T/R | 0.1924 | likely_benign | 0.1931 | benign | -0.873 | Destabilizing | 0.072 | N | 0.544 | neutral | None | None | None | None | N |
T/S | 0.1142 | likely_benign | 0.1139 | benign | -1.431 | Destabilizing | None | N | 0.183 | neutral | N | 0.475027174 | None | None | N |
T/V | 0.1285 | likely_benign | 0.1312 | benign | -0.224 | Destabilizing | None | N | 0.136 | neutral | None | None | None | None | N |
T/W | 0.6401 | likely_pathogenic | 0.651 | pathogenic | -0.679 | Destabilizing | 0.864 | D | 0.553 | neutral | None | None | None | None | N |
T/Y | 0.325 | likely_benign | 0.318 | benign | -0.361 | Destabilizing | 0.356 | N | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.