Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35320 | 106183;106184;106185 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
N2AB | 33679 | 101260;101261;101262 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
N2A | 32752 | 98479;98480;98481 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
N2B | 26255 | 78988;78989;78990 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
Novex-1 | 26380 | 79363;79364;79365 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
Novex-2 | 26447 | 79564;79565;79566 | chr2:178530657;178530656;178530655 | chr2:179395384;179395383;179395382 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1558988630 | None | 0.997 | N | 0.649 | 0.292 | 0.467585353272 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
Y/C | rs1558988630 | None | 0.997 | N | 0.649 | 0.292 | 0.467585353272 | gnomAD-4.0.0 | 1.36827E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 8.99394E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8797 | likely_pathogenic | 0.8157 | pathogenic | -2.666 | Highly Destabilizing | 0.842 | D | 0.582 | neutral | None | None | None | None | N |
Y/C | 0.3424 | ambiguous | 0.2796 | benign | -1.138 | Destabilizing | 0.997 | D | 0.649 | neutral | N | 0.481672138 | None | None | N |
Y/D | 0.8069 | likely_pathogenic | 0.7203 | pathogenic | -1.411 | Destabilizing | 0.966 | D | 0.669 | neutral | N | 0.463567883 | None | None | N |
Y/E | 0.8659 | likely_pathogenic | 0.797 | pathogenic | -1.304 | Destabilizing | 0.974 | D | 0.641 | neutral | None | None | None | None | N |
Y/F | 0.1207 | likely_benign | 0.106 | benign | -1.103 | Destabilizing | 0.012 | N | 0.352 | neutral | N | 0.473321649 | None | None | N |
Y/G | 0.8082 | likely_pathogenic | 0.733 | pathogenic | -2.998 | Highly Destabilizing | 0.974 | D | 0.65 | neutral | None | None | None | None | N |
Y/H | 0.3004 | likely_benign | 0.2326 | benign | -1.279 | Destabilizing | 0.989 | D | 0.555 | neutral | N | 0.447919163 | None | None | N |
Y/I | 0.7049 | likely_pathogenic | 0.5982 | pathogenic | -1.63 | Destabilizing | 0.728 | D | 0.544 | neutral | None | None | None | None | N |
Y/K | 0.7877 | likely_pathogenic | 0.6958 | pathogenic | -1.336 | Destabilizing | 0.974 | D | 0.639 | neutral | None | None | None | None | N |
Y/L | 0.5661 | likely_pathogenic | 0.4793 | ambiguous | -1.63 | Destabilizing | 0.016 | N | 0.401 | neutral | None | None | None | None | N |
Y/M | 0.7436 | likely_pathogenic | 0.669 | pathogenic | -1.23 | Destabilizing | 0.949 | D | 0.603 | neutral | None | None | None | None | N |
Y/N | 0.4356 | ambiguous | 0.3434 | ambiguous | -1.636 | Destabilizing | 0.989 | D | 0.657 | neutral | N | 0.456477538 | None | None | N |
Y/P | 0.9973 | likely_pathogenic | 0.996 | pathogenic | -1.975 | Destabilizing | 0.037 | N | 0.539 | neutral | None | None | None | None | N |
Y/Q | 0.7222 | likely_pathogenic | 0.6184 | pathogenic | -1.6 | Destabilizing | 0.991 | D | 0.605 | neutral | None | None | None | None | N |
Y/R | 0.6371 | likely_pathogenic | 0.5381 | ambiguous | -0.823 | Destabilizing | 0.974 | D | 0.656 | neutral | None | None | None | None | N |
Y/S | 0.5493 | ambiguous | 0.452 | ambiguous | -2.214 | Highly Destabilizing | 0.966 | D | 0.629 | neutral | N | 0.439739182 | None | None | N |
Y/T | 0.7884 | likely_pathogenic | 0.6997 | pathogenic | -2.016 | Highly Destabilizing | 0.974 | D | 0.632 | neutral | None | None | None | None | N |
Y/V | 0.6706 | likely_pathogenic | 0.574 | pathogenic | -1.975 | Destabilizing | 0.728 | D | 0.529 | neutral | None | None | None | None | N |
Y/W | 0.5301 | ambiguous | 0.4752 | ambiguous | -0.542 | Destabilizing | 0.998 | D | 0.548 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.