Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35327 | 106204;106205;106206 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
N2AB | 33686 | 101281;101282;101283 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
N2A | 32759 | 98500;98501;98502 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
N2B | 26262 | 79009;79010;79011 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
Novex-1 | 26387 | 79384;79385;79386 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
Novex-2 | 26454 | 79585;79586;79587 | chr2:178530636;178530635;178530634 | chr2:179395363;179395362;179395361 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs1164792965 | -0.29 | 1.0 | N | 0.5 | 0.556 | 0.407901774203 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/M | rs1164792965 | -0.29 | 1.0 | N | 0.5 | 0.556 | 0.407901774203 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3792 | ambiguous | 0.3534 | ambiguous | 0.001 | Stabilizing | 0.871 | D | 0.487 | neutral | None | None | None | None | N |
K/C | 0.8243 | likely_pathogenic | 0.7833 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
K/D | 0.6002 | likely_pathogenic | 0.5623 | ambiguous | -0.257 | Destabilizing | 0.97 | D | 0.513 | neutral | None | None | None | None | N |
K/E | 0.1603 | likely_benign | 0.1461 | benign | -0.239 | Destabilizing | 0.961 | D | 0.499 | neutral | N | 0.455694839 | None | None | N |
K/F | 0.8292 | likely_pathogenic | 0.7948 | pathogenic | -0.249 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
K/G | 0.5305 | ambiguous | 0.4929 | ambiguous | -0.167 | Destabilizing | 0.97 | D | 0.531 | neutral | None | None | None | None | N |
K/H | 0.442 | ambiguous | 0.4017 | ambiguous | -0.258 | Destabilizing | 1.0 | D | 0.499 | neutral | None | None | None | None | N |
K/I | 0.3939 | ambiguous | 0.3465 | ambiguous | 0.37 | Stabilizing | 0.996 | D | 0.616 | neutral | None | None | None | None | N |
K/L | 0.3884 | ambiguous | 0.3533 | ambiguous | 0.37 | Stabilizing | 0.985 | D | 0.525 | neutral | None | None | None | None | N |
K/M | 0.2678 | likely_benign | 0.2422 | benign | -0.14 | Destabilizing | 1.0 | D | 0.5 | neutral | N | 0.503902851 | None | None | N |
K/N | 0.4549 | ambiguous | 0.3976 | ambiguous | -0.047 | Destabilizing | 0.961 | D | 0.444 | neutral | N | 0.505006151 | None | None | N |
K/P | 0.6843 | likely_pathogenic | 0.745 | pathogenic | 0.272 | Stabilizing | 0.996 | D | 0.452 | neutral | None | None | None | None | N |
K/Q | 0.1527 | likely_benign | 0.1384 | benign | -0.129 | Destabilizing | 0.994 | D | 0.425 | neutral | N | 0.491058206 | None | None | N |
K/R | 0.0973 | likely_benign | 0.0949 | benign | -0.074 | Destabilizing | 0.98 | D | 0.431 | neutral | N | 0.489095336 | None | None | N |
K/S | 0.4633 | ambiguous | 0.4136 | ambiguous | -0.391 | Destabilizing | 0.348 | N | 0.211 | neutral | None | None | None | None | N |
K/T | 0.2019 | likely_benign | 0.1819 | benign | -0.239 | Destabilizing | 0.925 | D | 0.527 | neutral | N | 0.476782187 | None | None | N |
K/V | 0.383 | ambiguous | 0.3413 | ambiguous | 0.272 | Stabilizing | 0.996 | D | 0.477 | neutral | None | None | None | None | N |
K/W | 0.8154 | likely_pathogenic | 0.7953 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Y | 0.7375 | likely_pathogenic | 0.7033 | pathogenic | -0.012 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.