Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35331 | 106216;106217;106218 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
N2AB | 33690 | 101293;101294;101295 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
N2A | 32763 | 98512;98513;98514 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
N2B | 26266 | 79021;79022;79023 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
Novex-1 | 26391 | 79396;79397;79398 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
Novex-2 | 26458 | 79597;79598;79599 | chr2:178530624;178530623;178530622 | chr2:179395351;179395350;179395349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs753993485 | -0.579 | 0.99 | N | 0.427 | 0.446 | 0.363158594168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/N | rs753993485 | -0.579 | 0.99 | N | 0.427 | 0.446 | 0.363158594168 | gnomAD-4.0.0 | 1.59091E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | None | None | 0.997 | D | 0.442 | 0.404 | 0.40417439687 | gnomAD-4.0.0 | 1.59091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7187 | likely_pathogenic | 0.6512 | pathogenic | -0.722 | Destabilizing | 0.993 | D | 0.423 | neutral | None | None | None | None | N |
H/C | 0.3956 | ambiguous | 0.3336 | benign | 0.008 | Stabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
H/D | 0.555 | ambiguous | 0.503 | ambiguous | -0.442 | Destabilizing | 0.997 | D | 0.372 | neutral | N | 0.495943951 | None | None | N |
H/E | 0.7437 | likely_pathogenic | 0.6766 | pathogenic | -0.354 | Destabilizing | 0.985 | D | 0.372 | neutral | None | None | None | None | N |
H/F | 0.6476 | likely_pathogenic | 0.5913 | pathogenic | 0.281 | Stabilizing | 0.999 | D | 0.374 | neutral | None | None | None | None | N |
H/G | 0.7274 | likely_pathogenic | 0.65 | pathogenic | -1.084 | Destabilizing | 0.993 | D | 0.441 | neutral | None | None | None | None | N |
H/I | 0.653 | likely_pathogenic | 0.5892 | pathogenic | 0.27 | Stabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
H/K | 0.5166 | ambiguous | 0.4538 | ambiguous | -0.54 | Destabilizing | 0.971 | D | 0.36 | neutral | None | None | None | None | N |
H/L | 0.3039 | likely_benign | 0.2761 | benign | 0.27 | Stabilizing | 0.997 | D | 0.545 | neutral | N | 0.491404002 | None | None | N |
H/M | 0.8305 | likely_pathogenic | 0.7967 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.483 | neutral | None | None | None | None | N |
H/N | 0.2381 | likely_benign | 0.2144 | benign | -0.6 | Destabilizing | 0.99 | D | 0.427 | neutral | N | 0.491538209 | None | None | N |
H/P | 0.4082 | ambiguous | 0.3345 | benign | -0.039 | Destabilizing | 0.999 | D | 0.469 | neutral | D | 0.532000751 | None | None | N |
H/Q | 0.5164 | ambiguous | 0.4396 | ambiguous | -0.385 | Destabilizing | 0.994 | D | 0.4 | neutral | N | 0.49136485 | None | None | N |
H/R | 0.229 | likely_benign | 0.1894 | benign | -0.99 | Destabilizing | 0.135 | N | 0.245 | neutral | N | 0.41634423 | None | None | N |
H/S | 0.6085 | likely_pathogenic | 0.5361 | ambiguous | -0.664 | Destabilizing | 0.993 | D | 0.389 | neutral | None | None | None | None | N |
H/T | 0.6926 | likely_pathogenic | 0.6248 | pathogenic | -0.466 | Destabilizing | 0.998 | D | 0.432 | neutral | None | None | None | None | N |
H/V | 0.6556 | likely_pathogenic | 0.6034 | pathogenic | -0.039 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
H/W | 0.6808 | likely_pathogenic | 0.6465 | pathogenic | 0.524 | Stabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | N |
H/Y | 0.211 | likely_benign | 0.1933 | benign | 0.687 | Stabilizing | 0.997 | D | 0.442 | neutral | D | 0.524015986 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.