Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35350 | 106273;106274;106275 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
N2AB | 33709 | 101350;101351;101352 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
N2A | 32782 | 98569;98570;98571 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
N2B | 26285 | 79078;79079;79080 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
Novex-1 | 26410 | 79453;79454;79455 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
Novex-2 | 26477 | 79654;79655;79656 | chr2:178530567;178530566;178530565 | chr2:179395294;179395293;179395292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1688665396 | None | 0.029 | N | 0.407 | 0.168 | 0.260249123532 | gnomAD-4.0.0 | 1.44039E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.57501E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1182 | likely_benign | 0.1194 | benign | -0.395 | Destabilizing | None | N | 0.117 | neutral | N | 0.493154362 | None | None | N |
T/C | 0.5259 | ambiguous | 0.5472 | ambiguous | -0.089 | Destabilizing | 0.676 | D | 0.34 | neutral | None | None | None | None | N |
T/D | 0.4115 | ambiguous | 0.4039 | ambiguous | 0.066 | Stabilizing | 0.038 | N | 0.352 | neutral | None | None | None | None | N |
T/E | 0.3201 | likely_benign | 0.3047 | benign | 0.002 | Stabilizing | 0.038 | N | 0.33 | neutral | None | None | None | None | N |
T/F | 0.3936 | ambiguous | 0.4044 | ambiguous | -0.803 | Destabilizing | 0.214 | N | 0.423 | neutral | None | None | None | None | N |
T/G | 0.3043 | likely_benign | 0.3071 | benign | -0.56 | Destabilizing | 0.016 | N | 0.351 | neutral | None | None | None | None | N |
T/H | 0.3485 | ambiguous | 0.3474 | ambiguous | -0.897 | Destabilizing | 0.356 | N | 0.387 | neutral | None | None | None | None | N |
T/I | 0.325 | likely_benign | 0.3215 | benign | -0.073 | Destabilizing | 0.029 | N | 0.407 | neutral | N | 0.497595747 | None | None | N |
T/K | 0.1979 | likely_benign | 0.1863 | benign | -0.415 | Destabilizing | None | N | 0.193 | neutral | None | None | None | None | N |
T/L | 0.1503 | likely_benign | 0.1568 | benign | -0.073 | Destabilizing | 0.006 | N | 0.343 | neutral | None | None | None | None | N |
T/M | 0.1228 | likely_benign | 0.1285 | benign | 0.194 | Stabilizing | 0.007 | N | 0.278 | neutral | None | None | None | None | N |
T/N | 0.1656 | likely_benign | 0.1625 | benign | -0.145 | Destabilizing | 0.029 | N | 0.251 | neutral | N | 0.513086917 | None | None | N |
T/P | 0.4078 | ambiguous | 0.4223 | ambiguous | -0.15 | Destabilizing | 0.055 | N | 0.419 | neutral | D | 0.524347283 | None | None | N |
T/Q | 0.2372 | likely_benign | 0.2331 | benign | -0.367 | Destabilizing | 0.214 | N | 0.407 | neutral | None | None | None | None | N |
T/R | 0.1645 | likely_benign | 0.1619 | benign | -0.147 | Destabilizing | 0.038 | N | 0.401 | neutral | None | None | None | None | N |
T/S | 0.1266 | likely_benign | 0.1286 | benign | -0.351 | Destabilizing | None | N | 0.137 | neutral | N | 0.485977673 | None | None | N |
T/V | 0.2542 | likely_benign | 0.2512 | benign | -0.15 | Destabilizing | 0.016 | N | 0.255 | neutral | None | None | None | None | N |
T/W | 0.7132 | likely_pathogenic | 0.721 | pathogenic | -0.816 | Destabilizing | 0.864 | D | 0.423 | neutral | None | None | None | None | N |
T/Y | 0.4765 | ambiguous | 0.4762 | ambiguous | -0.545 | Destabilizing | 0.356 | N | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.