Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35351 | 106276;106277;106278 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
N2AB | 33710 | 101353;101354;101355 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
N2A | 32783 | 98572;98573;98574 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
N2B | 26286 | 79081;79082;79083 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
Novex-1 | 26411 | 79456;79457;79458 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
Novex-2 | 26478 | 79657;79658;79659 | chr2:178530564;178530563;178530562 | chr2:179395291;179395290;179395289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1688663690 | None | 0.811 | N | 0.383 | 0.174 | 0.163833314356 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
E/K | rs1688663690 | None | 0.811 | N | 0.383 | 0.174 | 0.163833314356 | gnomAD-4.0.0 | 6.57047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
E/Q | rs1688663690 | None | 0.211 | N | 0.235 | 0.096 | 0.146414634003 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
E/Q | rs1688663690 | None | 0.211 | N | 0.235 | 0.096 | 0.146414634003 | gnomAD-4.0.0 | 2.56117E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 4.50248E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1193 | likely_benign | 0.1114 | benign | -0.018 | Destabilizing | 0.896 | D | 0.382 | neutral | N | 0.466603534 | None | None | N |
E/C | 0.8873 | likely_pathogenic | 0.8833 | pathogenic | 0.04 | Stabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
E/D | 0.1406 | likely_benign | 0.1406 | benign | -0.19 | Destabilizing | 0.026 | N | 0.217 | neutral | N | 0.442813374 | None | None | N |
E/F | 0.7643 | likely_pathogenic | 0.7581 | pathogenic | -0.142 | Destabilizing | 0.996 | D | 0.511 | neutral | None | None | None | None | N |
E/G | 0.1522 | likely_benign | 0.1473 | benign | -0.124 | Destabilizing | 0.896 | D | 0.395 | neutral | N | 0.438698771 | None | None | N |
E/H | 0.507 | ambiguous | 0.5063 | ambiguous | 0.344 | Stabilizing | 0.988 | D | 0.282 | neutral | None | None | None | None | N |
E/I | 0.3769 | ambiguous | 0.3647 | ambiguous | 0.2 | Stabilizing | 0.988 | D | 0.515 | neutral | None | None | None | None | N |
E/K | 0.116 | likely_benign | 0.1084 | benign | 0.514 | Stabilizing | 0.811 | D | 0.383 | neutral | N | 0.449135281 | None | None | N |
E/L | 0.4309 | ambiguous | 0.42 | ambiguous | 0.2 | Stabilizing | 0.976 | D | 0.456 | neutral | None | None | None | None | N |
E/M | 0.5013 | ambiguous | 0.4909 | ambiguous | 0.117 | Stabilizing | 0.999 | D | 0.464 | neutral | None | None | None | None | N |
E/N | 0.2665 | likely_benign | 0.2604 | benign | 0.372 | Stabilizing | 0.919 | D | 0.292 | neutral | None | None | None | None | N |
E/P | 0.4345 | ambiguous | 0.3874 | ambiguous | 0.145 | Stabilizing | 0.988 | D | 0.33 | neutral | None | None | None | None | N |
E/Q | 0.1653 | likely_benign | 0.1602 | benign | 0.371 | Stabilizing | 0.211 | N | 0.235 | neutral | N | 0.495427718 | None | None | N |
E/R | 0.2457 | likely_benign | 0.2347 | benign | 0.642 | Stabilizing | 0.076 | N | 0.255 | neutral | None | None | None | None | N |
E/S | 0.1866 | likely_benign | 0.1782 | benign | 0.216 | Stabilizing | 0.919 | D | 0.317 | neutral | None | None | None | None | N |
E/T | 0.2352 | likely_benign | 0.2222 | benign | 0.308 | Stabilizing | 0.919 | D | 0.322 | neutral | None | None | None | None | N |
E/V | 0.2223 | likely_benign | 0.2178 | benign | 0.145 | Stabilizing | 0.984 | D | 0.399 | neutral | N | 0.473820295 | None | None | N |
E/W | 0.9127 | likely_pathogenic | 0.9069 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
E/Y | 0.6447 | likely_pathogenic | 0.6359 | pathogenic | 0.076 | Stabilizing | 0.996 | D | 0.444 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.