Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35356 | 106291;106292;106293 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
N2AB | 33715 | 101368;101369;101370 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
N2A | 32788 | 98587;98588;98589 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
N2B | 26291 | 79096;79097;79098 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
Novex-1 | 26416 | 79471;79472;79473 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
Novex-2 | 26483 | 79672;79673;79674 | chr2:178530549;178530548;178530547 | chr2:179395276;179395275;179395274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.014 | N | 0.371 | 0.054 | 0.269111216191 | gnomAD-4.0.0 | 1.36828E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79879E-06 | 0 | 0 |
E/K | rs886055218 | -0.304 | 0.058 | N | 0.39 | 0.201 | 0.272205846399 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
E/K | rs886055218 | -0.304 | 0.058 | N | 0.39 | 0.201 | 0.272205846399 | gnomAD-4.0.0 | 1.36829E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99397E-07 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2139 | likely_benign | 0.1894 | benign | -0.791 | Destabilizing | 0.822 | D | 0.595 | neutral | D | 0.533982264 | None | None | N |
E/C | 0.8852 | likely_pathogenic | 0.8618 | pathogenic | -0.456 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/D | 0.1837 | likely_benign | 0.1545 | benign | -1.267 | Destabilizing | 0.014 | N | 0.371 | neutral | N | 0.511972196 | None | None | N |
E/F | 0.7779 | likely_pathogenic | 0.7239 | pathogenic | -0.479 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
E/G | 0.2888 | likely_benign | 0.2361 | benign | -1.163 | Destabilizing | 0.822 | D | 0.67 | neutral | N | 0.499837473 | None | None | N |
E/H | 0.5748 | likely_pathogenic | 0.5053 | ambiguous | -0.931 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
E/I | 0.374 | ambiguous | 0.3221 | benign | 0.225 | Stabilizing | 0.978 | D | 0.786 | deleterious | None | None | None | None | N |
E/K | 0.1804 | likely_benign | 0.1473 | benign | -0.818 | Destabilizing | 0.058 | N | 0.39 | neutral | N | 0.501272413 | None | None | N |
E/L | 0.4855 | ambiguous | 0.4248 | ambiguous | 0.225 | Stabilizing | 0.978 | D | 0.77 | deleterious | None | None | None | None | N |
E/M | 0.4805 | ambiguous | 0.4364 | ambiguous | 0.759 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.2673 | likely_benign | 0.2211 | benign | -1.172 | Destabilizing | 0.915 | D | 0.637 | neutral | None | None | None | None | N |
E/P | 0.8907 | likely_pathogenic | 0.8569 | pathogenic | -0.092 | Destabilizing | 0.978 | D | 0.759 | deleterious | None | None | None | None | N |
E/Q | 0.1853 | likely_benign | 0.1585 | benign | -1.018 | Destabilizing | 0.942 | D | 0.595 | neutral | N | 0.514953786 | None | None | N |
E/R | 0.3398 | likely_benign | 0.2852 | benign | -0.667 | Destabilizing | 0.915 | D | 0.632 | neutral | None | None | None | None | N |
E/S | 0.2508 | likely_benign | 0.2115 | benign | -1.527 | Destabilizing | 0.754 | D | 0.533 | neutral | None | None | None | None | N |
E/T | 0.24 | likely_benign | 0.2068 | benign | -1.221 | Destabilizing | 0.956 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/V | 0.2597 | likely_benign | 0.2284 | benign | -0.092 | Destabilizing | 0.971 | D | 0.758 | deleterious | N | 0.479918493 | None | None | N |
E/W | 0.916 | likely_pathogenic | 0.8867 | pathogenic | -0.373 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/Y | 0.7049 | likely_pathogenic | 0.6326 | pathogenic | -0.272 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.