Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35357 | 106294;106295;106296 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
N2AB | 33716 | 101371;101372;101373 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
N2A | 32789 | 98590;98591;98592 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
N2B | 26292 | 79099;79100;79101 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
Novex-1 | 26417 | 79474;79475;79476 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
Novex-2 | 26484 | 79675;79676;79677 | chr2:178530546;178530545;178530544 | chr2:179395273;179395272;179395271 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1649011462 | None | 1.0 | D | 0.785 | 0.887 | 0.720476626281 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | rs1649011462 | None | 1.0 | D | 0.785 | 0.887 | 0.720476626281 | gnomAD-4.0.0 | 6.57047E-06 | None | None | None | None | N | None | 0 | 6.54536E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9958 | likely_pathogenic | 0.9945 | pathogenic | -2.144 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/C | 0.9817 | likely_pathogenic | 0.9722 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.88 | deleterious | D | 0.65897745 | None | None | N |
Y/D | 0.995 | likely_pathogenic | 0.9946 | pathogenic | -3.035 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.658775646 | None | None | N |
Y/E | 0.9984 | likely_pathogenic | 0.9981 | pathogenic | -2.792 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/F | 0.3191 | likely_benign | 0.2882 | benign | -0.819 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | D | 0.594042787 | None | None | N |
Y/G | 0.9892 | likely_pathogenic | 0.9878 | pathogenic | -2.579 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/H | 0.9878 | likely_pathogenic | 0.983 | pathogenic | -2.209 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.658573841 | None | None | N |
Y/I | 0.9269 | likely_pathogenic | 0.9123 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/K | 0.9985 | likely_pathogenic | 0.9983 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/L | 0.8862 | likely_pathogenic | 0.8692 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
Y/M | 0.9731 | likely_pathogenic | 0.9657 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/N | 0.9816 | likely_pathogenic | 0.9778 | pathogenic | -2.913 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.658775646 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
Y/Q | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/R | 0.9963 | likely_pathogenic | 0.9955 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
Y/S | 0.9934 | likely_pathogenic | 0.9914 | pathogenic | -3.109 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.658775646 | None | None | N |
Y/T | 0.995 | likely_pathogenic | 0.9934 | pathogenic | -2.718 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.9188 | likely_pathogenic | 0.9046 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/W | 0.8874 | likely_pathogenic | 0.8678 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.