Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35367 | 106324;106325;106326 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
N2AB | 33726 | 101401;101402;101403 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
N2A | 32799 | 98620;98621;98622 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
N2B | 26302 | 79129;79130;79131 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
Novex-1 | 26427 | 79504;79505;79506 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
Novex-2 | 26494 | 79705;79706;79707 | chr2:178530516;178530515;178530514 | chr2:179395243;179395242;179395241 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs377056111 | -0.02 | 0.808 | N | 0.461 | 0.138 | None | gnomAD-2.1.1 | 4.28E-05 | None | None | None | None | I | None | 4.13E-05 | 2.83E-05 | None | 0 | 0 | None | 3.27E-05 | None | 1.59936E-04 | 3.12E-05 | 1.40252E-04 |
T/M | rs377056111 | -0.02 | 0.808 | N | 0.461 | 0.138 | None | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 2.41E-05 | 6.54E-05 | 0 | 0 | 0 | None | 1.8875E-04 | 0 | 4.41E-05 | 0 | 0 |
T/M | rs377056111 | -0.02 | 0.808 | N | 0.461 | 0.138 | None | gnomAD-4.0.0 | 1.10918E-04 | None | None | None | None | I | None | 5.34131E-05 | 1.66639E-05 | None | 0 | 2.22737E-05 | None | 3.28197E-04 | 0 | 1.24588E-04 | 1.09803E-05 | 6.40369E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0807 | likely_benign | 0.0861 | benign | -0.548 | Destabilizing | None | N | 0.105 | neutral | N | 0.46829599 | None | None | I |
T/C | 0.367 | ambiguous | 0.3893 | ambiguous | -0.275 | Destabilizing | 0.667 | D | 0.469 | neutral | None | None | None | None | I |
T/D | 0.3421 | ambiguous | 0.3404 | ambiguous | 0.154 | Stabilizing | 0.124 | N | 0.381 | neutral | None | None | None | None | I |
T/E | 0.294 | likely_benign | 0.2896 | benign | 0.07 | Stabilizing | 0.002 | N | 0.201 | neutral | None | None | None | None | I |
T/F | 0.1913 | likely_benign | 0.1868 | benign | -1.066 | Destabilizing | 0.497 | N | 0.501 | neutral | None | None | None | None | I |
T/G | 0.2461 | likely_benign | 0.2611 | benign | -0.664 | Destabilizing | 0.055 | N | 0.446 | neutral | None | None | None | None | I |
T/H | 0.2446 | likely_benign | 0.2298 | benign | -1.005 | Destabilizing | 0.859 | D | 0.487 | neutral | None | None | None | None | I |
T/I | 0.11 | likely_benign | 0.1097 | benign | -0.359 | Destabilizing | None | N | 0.185 | neutral | None | None | None | None | I |
T/K | 0.1829 | likely_benign | 0.1706 | benign | -0.367 | Destabilizing | 0.351 | N | 0.376 | neutral | N | 0.468311845 | None | None | I |
T/L | 0.105 | likely_benign | 0.106 | benign | -0.359 | Destabilizing | 0.025 | N | 0.279 | neutral | None | None | None | None | I |
T/M | 0.1026 | likely_benign | 0.1033 | benign | -0.009 | Destabilizing | 0.808 | D | 0.461 | neutral | N | 0.516012579 | None | None | I |
T/N | 0.1183 | likely_benign | 0.1161 | benign | -0.101 | Destabilizing | 0.364 | N | 0.376 | neutral | None | None | None | None | I |
T/P | 0.16 | likely_benign | 0.1674 | benign | -0.395 | Destabilizing | 0.301 | N | 0.47 | neutral | D | 0.524728062 | None | None | I |
T/Q | 0.2315 | likely_benign | 0.2209 | benign | -0.397 | Destabilizing | 0.22 | N | 0.459 | neutral | None | None | None | None | I |
T/R | 0.1519 | likely_benign | 0.1401 | benign | -0.081 | Destabilizing | 0.351 | N | 0.455 | neutral | N | 0.490999491 | None | None | I |
T/S | 0.1073 | likely_benign | 0.1095 | benign | -0.355 | Destabilizing | 0.042 | N | 0.28 | neutral | N | 0.451902385 | None | None | I |
T/V | 0.1095 | likely_benign | 0.1139 | benign | -0.395 | Destabilizing | None | N | 0.121 | neutral | None | None | None | None | I |
T/W | 0.5857 | likely_pathogenic | 0.566 | pathogenic | -1.009 | Destabilizing | 0.958 | D | 0.489 | neutral | None | None | None | None | I |
T/Y | 0.2692 | likely_benign | 0.2565 | benign | -0.747 | Destabilizing | 0.859 | D | 0.494 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.