Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35371 | 106336;106337;106338 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
N2AB | 33730 | 101413;101414;101415 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
N2A | 32803 | 98632;98633;98634 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
N2B | 26306 | 79141;79142;79143 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
Novex-1 | 26431 | 79516;79517;79518 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
Novex-2 | 26498 | 79717;79718;79719 | chr2:178530504;178530503;178530502 | chr2:179395231;179395230;179395229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1200663369 | -0.482 | None | N | 0.207 | 0.065 | 0.0716867268079 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1656 | likely_benign | 0.1824 | benign | -0.683 | Destabilizing | 0.007 | N | 0.482 | neutral | None | None | None | None | N |
N/C | 0.2125 | likely_benign | 0.2457 | benign | 0.134 | Stabilizing | 0.676 | D | 0.637 | neutral | None | None | None | None | N |
N/D | 0.1295 | likely_benign | 0.1335 | benign | -0.21 | Destabilizing | 0.012 | N | 0.482 | neutral | N | 0.499560259 | None | None | N |
N/E | 0.3393 | likely_benign | 0.3647 | ambiguous | -0.141 | Destabilizing | 0.016 | N | 0.493 | neutral | None | None | None | None | N |
N/F | 0.4354 | ambiguous | 0.4633 | ambiguous | -0.457 | Destabilizing | 0.356 | N | 0.66 | neutral | None | None | None | None | N |
N/G | 0.2396 | likely_benign | 0.2612 | benign | -1.003 | Destabilizing | 0.016 | N | 0.376 | neutral | None | None | None | None | N |
N/H | 0.0945 | likely_benign | 0.0933 | benign | -0.813 | Destabilizing | 0.295 | N | 0.591 | neutral | N | 0.485212257 | None | None | N |
N/I | 0.16 | likely_benign | 0.1726 | benign | 0.118 | Stabilizing | 0.055 | N | 0.679 | prob.neutral | D | 0.522591834 | None | None | N |
N/K | 0.2442 | likely_benign | 0.2529 | benign | -0.269 | Destabilizing | 0.012 | N | 0.48 | neutral | N | 0.494959729 | None | None | N |
N/L | 0.2039 | likely_benign | 0.219 | benign | 0.118 | Stabilizing | 0.038 | N | 0.593 | neutral | None | None | None | None | N |
N/M | 0.304 | likely_benign | 0.323 | benign | 0.463 | Stabilizing | 0.628 | D | 0.633 | neutral | None | None | None | None | N |
N/P | 0.5077 | ambiguous | 0.5758 | pathogenic | -0.118 | Destabilizing | 0.072 | N | 0.673 | neutral | None | None | None | None | N |
N/Q | 0.285 | likely_benign | 0.3055 | benign | -0.708 | Destabilizing | 0.072 | N | 0.569 | neutral | None | None | None | None | N |
N/R | 0.2665 | likely_benign | 0.2757 | benign | -0.327 | Destabilizing | 0.072 | N | 0.549 | neutral | None | None | None | None | N |
N/S | 0.0601 | likely_benign | 0.0639 | benign | -0.717 | Destabilizing | None | N | 0.207 | neutral | N | 0.445379058 | None | None | N |
N/T | 0.0882 | likely_benign | 0.093 | benign | -0.467 | Destabilizing | None | N | 0.182 | neutral | N | 0.466370405 | None | None | N |
N/V | 0.1715 | likely_benign | 0.1823 | benign | -0.118 | Destabilizing | 0.038 | N | 0.624 | neutral | None | None | None | None | N |
N/W | 0.73 | likely_pathogenic | 0.77 | pathogenic | -0.261 | Destabilizing | 0.864 | D | 0.65 | neutral | None | None | None | None | N |
N/Y | 0.1566 | likely_benign | 0.1608 | benign | -0.07 | Destabilizing | 0.295 | N | 0.654 | neutral | N | 0.507854455 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.