Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35375 | 106348;106349;106350 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
N2AB | 33734 | 101425;101426;101427 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
N2A | 32807 | 98644;98645;98646 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
N2B | 26310 | 79153;79154;79155 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
Novex-1 | 26435 | 79528;79529;79530 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
Novex-2 | 26502 | 79729;79730;79731 | chr2:178530492;178530491;178530490 | chr2:179395219;179395218;179395217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | None | N | 0.188 | 0.065 | 0.128392430309 | gnomAD-4.0.0 | 1.59093E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85753E-06 | 0 | 0 |
M/T | None | None | None | N | 0.195 | 0.091 | 0.203808441222 | gnomAD-4.0.0 | 2.05244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99399E-07 | 2.31868E-05 | 0 |
M/V | None | None | None | N | 0.147 | 0.101 | 0.0954503805726 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.1513 | likely_benign | 0.1473 | benign | -0.309 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
M/C | 0.5274 | ambiguous | 0.5179 | ambiguous | -0.413 | Destabilizing | 0.041 | N | 0.353 | neutral | None | None | None | None | N |
M/D | 0.4961 | ambiguous | 0.454 | ambiguous | 0.589 | Stabilizing | 0.002 | N | 0.385 | neutral | None | None | None | None | N |
M/E | 0.2033 | likely_benign | 0.1904 | benign | 0.549 | Stabilizing | 0.001 | N | 0.335 | neutral | None | None | None | None | N |
M/F | 0.2223 | likely_benign | 0.2223 | benign | 0.078 | Stabilizing | 0.009 | N | 0.227 | neutral | None | None | None | None | N |
M/G | 0.3508 | ambiguous | 0.3257 | benign | -0.488 | Destabilizing | 0.001 | N | 0.312 | neutral | None | None | None | None | N |
M/H | 0.2672 | likely_benign | 0.2537 | benign | 0.359 | Stabilizing | 0.041 | N | 0.423 | neutral | None | None | None | None | N |
M/I | 0.1518 | likely_benign | 0.1591 | benign | 0.068 | Stabilizing | None | N | 0.188 | neutral | N | 0.424768925 | None | None | N |
M/K | 0.0835 | likely_benign | 0.0824 | benign | 0.532 | Stabilizing | None | N | 0.197 | neutral | N | 0.443007969 | None | None | N |
M/L | 0.1064 | likely_benign | 0.1063 | benign | 0.068 | Stabilizing | None | N | 0.181 | neutral | N | 0.418149597 | None | None | N |
M/N | 0.2401 | likely_benign | 0.2265 | benign | 0.615 | Stabilizing | 0.002 | N | 0.367 | neutral | None | None | None | None | N |
M/P | 0.6362 | likely_pathogenic | 0.5393 | ambiguous | -0.029 | Destabilizing | 0.008 | N | 0.391 | neutral | None | None | None | None | N |
M/Q | 0.1213 | likely_benign | 0.1189 | benign | 0.496 | Stabilizing | 0.002 | N | 0.195 | neutral | None | None | None | None | N |
M/R | 0.0872 | likely_benign | 0.0853 | benign | 0.967 | Stabilizing | None | N | 0.201 | neutral | N | 0.460822939 | None | None | N |
M/S | 0.155 | likely_benign | 0.145 | benign | 0.126 | Stabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
M/T | 0.0651 | likely_benign | 0.0658 | benign | 0.195 | Stabilizing | None | N | 0.195 | neutral | N | 0.367680704 | None | None | N |
M/V | 0.0695 | likely_benign | 0.0706 | benign | -0.029 | Destabilizing | None | N | 0.147 | neutral | N | 0.372627951 | None | None | N |
M/W | 0.4523 | ambiguous | 0.4131 | ambiguous | 0.073 | Stabilizing | 0.316 | N | 0.302 | neutral | None | None | None | None | N |
M/Y | 0.441 | ambiguous | 0.4033 | ambiguous | 0.242 | Stabilizing | 0.018 | N | 0.39 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.