Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35421 | 106486;106487;106488 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
N2AB | 33780 | 101563;101564;101565 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
N2A | 32853 | 98782;98783;98784 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
N2B | 26356 | 79291;79292;79293 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
Novex-1 | 26481 | 79666;79667;79668 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
Novex-2 | 26548 | 79867;79868;79869 | chr2:178530354;178530353;178530352 | chr2:179395081;179395080;179395079 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.002 | N | 0.135 | 0.09 | 0.375861065471 | gnomAD-4.0.0 | 1.59093E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1261 | likely_benign | 0.1159 | benign | -0.572 | Destabilizing | 0.393 | N | 0.288 | neutral | N | 0.500043049 | None | None | I |
V/C | 0.7544 | likely_pathogenic | 0.7234 | pathogenic | -0.793 | Destabilizing | 0.994 | D | 0.375 | neutral | None | None | None | None | I |
V/D | 0.2272 | likely_benign | 0.215 | benign | -0.351 | Destabilizing | 0.51 | D | 0.335 | neutral | None | None | None | None | I |
V/E | 0.1568 | likely_benign | 0.1468 | benign | -0.423 | Destabilizing | 0.005 | N | 0.238 | neutral | N | 0.477088831 | None | None | I |
V/F | 0.1525 | likely_benign | 0.1505 | benign | -0.592 | Destabilizing | 0.879 | D | 0.426 | neutral | None | None | None | None | I |
V/G | 0.1887 | likely_benign | 0.1797 | benign | -0.742 | Destabilizing | 0.761 | D | 0.375 | neutral | N | 0.518764882 | None | None | I |
V/H | 0.4695 | ambiguous | 0.4474 | ambiguous | -0.154 | Destabilizing | 0.982 | D | 0.383 | neutral | None | None | None | None | I |
V/I | 0.0826 | likely_benign | 0.0796 | benign | -0.252 | Destabilizing | 0.245 | N | 0.293 | neutral | N | 0.492002355 | None | None | I |
V/K | 0.2165 | likely_benign | 0.2051 | benign | -0.578 | Destabilizing | 0.51 | D | 0.317 | neutral | None | None | None | None | I |
V/L | 0.1664 | likely_benign | 0.1551 | benign | -0.252 | Destabilizing | 0.002 | N | 0.135 | neutral | N | 0.509433323 | None | None | I |
V/M | 0.1247 | likely_benign | 0.1194 | benign | -0.494 | Destabilizing | 0.879 | D | 0.431 | neutral | None | None | None | None | I |
V/N | 0.1827 | likely_benign | 0.1689 | benign | -0.441 | Destabilizing | 0.879 | D | 0.402 | neutral | None | None | None | None | I |
V/P | 0.762 | likely_pathogenic | 0.757 | pathogenic | -0.324 | Destabilizing | 0.937 | D | 0.385 | neutral | None | None | None | None | I |
V/Q | 0.2155 | likely_benign | 0.2077 | benign | -0.615 | Destabilizing | 0.785 | D | 0.372 | neutral | None | None | None | None | I |
V/R | 0.1891 | likely_benign | 0.1841 | benign | -0.076 | Destabilizing | 0.879 | D | 0.401 | neutral | None | None | None | None | I |
V/S | 0.1446 | likely_benign | 0.139 | benign | -0.831 | Destabilizing | 0.675 | D | 0.315 | neutral | None | None | None | None | I |
V/T | 0.1325 | likely_benign | 0.1239 | benign | -0.793 | Destabilizing | 0.675 | D | 0.269 | neutral | None | None | None | None | I |
V/W | 0.7965 | likely_pathogenic | 0.7895 | pathogenic | -0.689 | Destabilizing | 0.994 | D | 0.442 | neutral | None | None | None | None | I |
V/Y | 0.4832 | ambiguous | 0.4661 | ambiguous | -0.399 | Destabilizing | 0.978 | D | 0.419 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.