Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35426 | 106501;106502;106503 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
N2AB | 33785 | 101578;101579;101580 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
N2A | 32858 | 98797;98798;98799 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
N2B | 26361 | 79306;79307;79308 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
Novex-1 | 26486 | 79681;79682;79683 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
Novex-2 | 26553 | 79882;79883;79884 | chr2:178530339;178530338;178530337 | chr2:179395066;179395065;179395064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.999 | N | 0.846 | 0.333 | 0.782707291019 | gnomAD-4.0.0 | 1.59095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85757E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8116 | likely_pathogenic | 0.8092 | pathogenic | -1.881 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
L/C | 0.9035 | likely_pathogenic | 0.8913 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9899 | likely_pathogenic | 0.9889 | pathogenic | -1.052 | Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
L/E | 0.9471 | likely_pathogenic | 0.9463 | pathogenic | -0.997 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
L/F | 0.4159 | ambiguous | 0.4127 | ambiguous | -1.35 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.46537026 | None | None | N |
L/G | 0.9392 | likely_pathogenic | 0.9355 | pathogenic | -2.253 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.8952 | likely_pathogenic | 0.8916 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/I | 0.1961 | likely_benign | 0.1994 | benign | -0.905 | Destabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | N |
L/K | 0.9113 | likely_pathogenic | 0.913 | pathogenic | -1.109 | Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
L/M | 0.269 | likely_benign | 0.2705 | benign | -0.911 | Destabilizing | 0.999 | D | 0.743 | deleterious | N | 0.459369553 | None | None | N |
L/N | 0.9357 | likely_pathogenic | 0.9308 | pathogenic | -1.023 | Destabilizing | 0.999 | D | 0.904 | deleterious | None | None | None | None | N |
L/P | 0.8196 | likely_pathogenic | 0.7898 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | N |
L/Q | 0.8215 | likely_pathogenic | 0.8189 | pathogenic | -1.142 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/R | 0.8718 | likely_pathogenic | 0.8724 | pathogenic | -0.657 | Destabilizing | 0.999 | D | 0.874 | deleterious | None | None | None | None | N |
L/S | 0.9038 | likely_pathogenic | 0.898 | pathogenic | -1.791 | Destabilizing | 0.999 | D | 0.846 | deleterious | N | 0.468915433 | None | None | N |
L/T | 0.8083 | likely_pathogenic | 0.8061 | pathogenic | -1.603 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/V | 0.3127 | likely_benign | 0.3176 | benign | -1.201 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.464863281 | None | None | N |
L/W | 0.8148 | likely_pathogenic | 0.8201 | pathogenic | -1.393 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.506137901 | None | None | N |
L/Y | 0.9058 | likely_pathogenic | 0.91 | pathogenic | -1.14 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.