Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35427 | 106504;106505;106506 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
N2AB | 33786 | 101581;101582;101583 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
N2A | 32859 | 98800;98801;98802 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
N2B | 26362 | 79309;79310;79311 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
Novex-1 | 26487 | 79684;79685;79686 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
Novex-2 | 26554 | 79885;79886;79887 | chr2:178530336;178530335;178530334 | chr2:179395063;179395062;179395061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | None | N | 0.075 | 0.077 | 0.178374595973 | gnomAD-4.0.0 | 1.59097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85755E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1904 | likely_benign | 0.2027 | benign | -0.093 | Destabilizing | 0.003 | N | 0.168 | neutral | None | None | None | None | I |
Q/C | 0.6311 | likely_pathogenic | 0.6756 | pathogenic | 0.063 | Stabilizing | 0.712 | D | 0.307 | neutral | None | None | None | None | I |
Q/D | 0.3688 | ambiguous | 0.3735 | ambiguous | -0.058 | Destabilizing | 0.012 | N | 0.227 | neutral | None | None | None | None | I |
Q/E | 0.0833 | likely_benign | 0.0828 | benign | -0.107 | Destabilizing | 0.002 | N | 0.139 | neutral | N | 0.468469348 | None | None | I |
Q/F | 0.602 | likely_pathogenic | 0.6471 | pathogenic | -0.447 | Destabilizing | 0.177 | N | 0.349 | neutral | None | None | None | None | I |
Q/G | 0.2321 | likely_benign | 0.2486 | benign | -0.226 | Destabilizing | 0.012 | N | 0.28 | neutral | None | None | None | None | I |
Q/H | 0.1886 | likely_benign | 0.2076 | benign | -0.064 | Destabilizing | 0.14 | N | 0.297 | neutral | N | 0.519418243 | None | None | I |
Q/I | 0.3246 | likely_benign | 0.3546 | ambiguous | 0.16 | Stabilizing | 0.177 | N | 0.407 | neutral | None | None | None | None | I |
Q/K | 0.0779 | likely_benign | 0.0782 | benign | 0.081 | Stabilizing | None | N | 0.083 | neutral | N | 0.428062733 | None | None | I |
Q/L | 0.1297 | likely_benign | 0.1415 | benign | 0.16 | Stabilizing | 0.009 | N | 0.312 | neutral | D | 0.522015831 | None | None | I |
Q/M | 0.3472 | ambiguous | 0.3774 | ambiguous | 0.234 | Stabilizing | 0.396 | N | 0.3 | neutral | None | None | None | None | I |
Q/N | 0.265 | likely_benign | 0.2675 | benign | -0.183 | Destabilizing | 0.012 | N | 0.227 | neutral | None | None | None | None | I |
Q/P | 0.1896 | likely_benign | 0.1929 | benign | 0.101 | Stabilizing | 0.044 | N | 0.322 | neutral | N | 0.519418243 | None | None | I |
Q/R | 0.0909 | likely_benign | 0.0982 | benign | 0.266 | Stabilizing | None | N | 0.075 | neutral | N | 0.471893655 | None | None | I |
Q/S | 0.2299 | likely_benign | 0.2365 | benign | -0.163 | Destabilizing | None | N | 0.089 | neutral | None | None | None | None | I |
Q/T | 0.1852 | likely_benign | 0.1949 | benign | -0.077 | Destabilizing | 0.012 | N | 0.311 | neutral | None | None | None | None | I |
Q/V | 0.2359 | likely_benign | 0.259 | benign | 0.101 | Stabilizing | 0.029 | N | 0.353 | neutral | None | None | None | None | I |
Q/W | 0.4486 | ambiguous | 0.5089 | ambiguous | -0.496 | Destabilizing | 0.712 | D | 0.308 | neutral | None | None | None | None | I |
Q/Y | 0.4059 | ambiguous | 0.4471 | ambiguous | -0.207 | Destabilizing | 0.177 | N | 0.381 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.