Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35434 | 106525;106526;106527 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
N2AB | 33793 | 101602;101603;101604 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
N2A | 32866 | 98821;98822;98823 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
N2B | 26369 | 79330;79331;79332 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
Novex-1 | 26494 | 79705;79706;79707 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
Novex-2 | 26561 | 79906;79907;79908 | chr2:178530315;178530314;178530313 | chr2:179395042;179395041;179395040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1371891927 | 0.204 | None | N | 0.193 | 0.086 | 0.0551355673512 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs1371891927 | 0.204 | None | N | 0.193 | 0.086 | 0.0551355673512 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs1371891927 | 0.204 | None | N | 0.193 | 0.086 | 0.0551355673512 | gnomAD-4.0.0 | 6.5703E-06 | None | None | None | None | N | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1362199779 | 0.066 | 0.037 | N | 0.473 | 0.105 | 0.0716867268079 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
D/G | rs1362199779 | 0.066 | 0.037 | N | 0.473 | 0.105 | 0.0716867268079 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/G | rs1362199779 | 0.066 | 0.037 | N | 0.473 | 0.105 | 0.0716867268079 | gnomAD-4.0.0 | 3.71785E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08533E-06 | 0 | 0 |
D/H | rs770168784 | 0.016 | 0.395 | N | 0.591 | 0.173 | 0.226586394389 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.85E-06 | 0 |
D/H | rs770168784 | 0.016 | 0.395 | N | 0.591 | 0.173 | 0.226586394389 | gnomAD-4.0.0 | 6.84185E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99431E-07 | 0 | 0 |
D/Y | None | None | 0.801 | D | 0.614 | 0.408 | 0.611906392123 | gnomAD-4.0.0 | 6.84185E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99431E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.161 | likely_benign | 0.1951 | benign | -0.077 | Destabilizing | 0.157 | N | 0.499 | neutral | N | 0.478032981 | None | None | N |
D/C | 0.6475 | likely_pathogenic | 0.6859 | pathogenic | 0.4 | Stabilizing | 0.953 | D | 0.62 | neutral | None | None | None | None | N |
D/E | 0.1879 | likely_benign | 0.2112 | benign | -0.088 | Destabilizing | None | N | 0.193 | neutral | N | 0.480590496 | None | None | N |
D/F | 0.5291 | ambiguous | 0.6006 | pathogenic | -0.336 | Destabilizing | 0.842 | D | 0.617 | neutral | None | None | None | None | N |
D/G | 0.121 | likely_benign | 0.133 | benign | -0.184 | Destabilizing | 0.037 | N | 0.473 | neutral | N | 0.328052376 | None | None | N |
D/H | 0.259 | likely_benign | 0.3122 | benign | -0.176 | Destabilizing | 0.395 | N | 0.591 | neutral | N | 0.492116999 | None | None | N |
D/I | 0.3688 | ambiguous | 0.451 | ambiguous | 0.139 | Stabilizing | 0.637 | D | 0.613 | neutral | None | None | None | None | N |
D/K | 0.3042 | likely_benign | 0.342 | ambiguous | 0.7 | Stabilizing | 0.11 | N | 0.478 | neutral | None | None | None | None | N |
D/L | 0.355 | ambiguous | 0.4205 | ambiguous | 0.139 | Stabilizing | 0.198 | N | 0.621 | neutral | None | None | None | None | N |
D/M | 0.6249 | likely_pathogenic | 0.6953 | pathogenic | 0.331 | Stabilizing | 0.953 | D | 0.612 | neutral | None | None | None | None | N |
D/N | 0.0807 | likely_benign | 0.0899 | benign | 0.573 | Stabilizing | None | N | 0.186 | neutral | N | 0.423910494 | None | None | N |
D/P | 0.6202 | likely_pathogenic | 0.7068 | pathogenic | 0.086 | Stabilizing | 0.637 | D | 0.571 | neutral | None | None | None | None | N |
D/Q | 0.316 | likely_benign | 0.3709 | ambiguous | 0.565 | Stabilizing | 0.11 | N | 0.403 | neutral | None | None | None | None | N |
D/R | 0.3325 | likely_benign | 0.3851 | ambiguous | 0.618 | Stabilizing | 0.198 | N | 0.587 | neutral | None | None | None | None | N |
D/S | 0.1039 | likely_benign | 0.1219 | benign | 0.497 | Stabilizing | 0.049 | N | 0.362 | neutral | None | None | None | None | N |
D/T | 0.222 | likely_benign | 0.261 | benign | 0.584 | Stabilizing | 0.198 | N | 0.515 | neutral | None | None | None | None | N |
D/V | 0.2357 | likely_benign | 0.2883 | benign | 0.086 | Stabilizing | 0.57 | D | 0.623 | neutral | D | 0.532520826 | None | None | N |
D/W | 0.8613 | likely_pathogenic | 0.893 | pathogenic | -0.327 | Destabilizing | 0.953 | D | 0.633 | neutral | None | None | None | None | N |
D/Y | 0.221 | likely_benign | 0.2498 | benign | -0.125 | Destabilizing | 0.801 | D | 0.614 | neutral | D | 0.532694185 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.