Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35437 | 106534;106535;106536 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
N2AB | 33796 | 101611;101612;101613 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
N2A | 32869 | 98830;98831;98832 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
N2B | 26372 | 79339;79340;79341 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
Novex-1 | 26497 | 79714;79715;79716 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
Novex-2 | 26564 | 79915;79916;79917 | chr2:178530306;178530305;178530304 | chr2:179395033;179395032;179395031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.467 | 0.059 | 0.0846915920261 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.652 | likely_pathogenic | 0.6993 | pathogenic | -0.885 | Destabilizing | 0.646 | D | 0.682 | prob.neutral | None | None | None | None | N |
A/D | 0.858 | likely_pathogenic | 0.8882 | pathogenic | -1.671 | Destabilizing | 0.153 | N | 0.772 | deleterious | N | 0.470370237 | None | None | N |
A/E | 0.7199 | likely_pathogenic | 0.7492 | pathogenic | -1.525 | Destabilizing | 0.193 | N | 0.787 | deleterious | None | None | None | None | N |
A/F | 0.5891 | likely_pathogenic | 0.6648 | pathogenic | -0.704 | Destabilizing | 0.193 | N | 0.787 | deleterious | None | None | None | None | N |
A/G | 0.2542 | likely_benign | 0.2792 | benign | -1.427 | Destabilizing | 0.049 | N | 0.677 | prob.neutral | N | 0.504042493 | None | None | N |
A/H | 0.8841 | likely_pathogenic | 0.9101 | pathogenic | -1.69 | Destabilizing | 0.848 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/I | 0.2785 | likely_benign | 0.3203 | benign | 0.14 | Stabilizing | None | N | 0.511 | neutral | None | None | None | None | N |
A/K | 0.8518 | likely_pathogenic | 0.8751 | pathogenic | -1.285 | Destabilizing | 0.193 | N | 0.793 | deleterious | None | None | None | None | N |
A/L | 0.2595 | likely_benign | 0.3128 | benign | 0.14 | Stabilizing | 0.014 | N | 0.593 | neutral | None | None | None | None | N |
A/M | 0.3604 | ambiguous | 0.4366 | ambiguous | 0.055 | Stabilizing | 0.193 | N | 0.755 | deleterious | None | None | None | None | N |
A/N | 0.7625 | likely_pathogenic | 0.8131 | pathogenic | -1.371 | Destabilizing | 0.193 | N | 0.785 | deleterious | None | None | None | None | N |
A/P | 0.869 | likely_pathogenic | 0.8905 | pathogenic | -0.191 | Destabilizing | 0.268 | N | 0.796 | deleterious | N | 0.463368797 | None | None | N |
A/Q | 0.7157 | likely_pathogenic | 0.7506 | pathogenic | -1.262 | Destabilizing | 0.326 | N | 0.765 | deleterious | None | None | None | None | N |
A/R | 0.7924 | likely_pathogenic | 0.8171 | pathogenic | -1.224 | Destabilizing | 0.193 | N | 0.798 | deleterious | None | None | None | None | N |
A/S | 0.1781 | likely_benign | 0.2085 | benign | -1.826 | Destabilizing | 0.025 | N | 0.631 | neutral | N | 0.5118539 | None | None | N |
A/T | 0.1261 | likely_benign | 0.146 | benign | -1.548 | Destabilizing | None | N | 0.467 | neutral | N | 0.462483872 | None | None | N |
A/V | 0.1244 | likely_benign | 0.1407 | benign | -0.191 | Destabilizing | None | N | 0.268 | neutral | N | 0.360601937 | None | None | N |
A/W | 0.9263 | likely_pathogenic | 0.9502 | pathogenic | -1.348 | Destabilizing | 0.848 | D | 0.769 | deleterious | None | None | None | None | N |
A/Y | 0.8249 | likely_pathogenic | 0.8676 | pathogenic | -0.788 | Destabilizing | 0.326 | N | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.