Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35438 | 106537;106538;106539 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
N2AB | 33797 | 101614;101615;101616 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
N2A | 32870 | 98833;98834;98835 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
N2B | 26373 | 79342;79343;79344 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
Novex-1 | 26498 | 79717;79718;79719 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
Novex-2 | 26565 | 79918;79919;79920 | chr2:178530303;178530302;178530301 | chr2:179395030;179395029;179395028 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs755067124 | 0.401 | 0.076 | N | 0.684 | 0.243 | 0.144782658237 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 1.29166E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs755067124 | 0.401 | 0.076 | N | 0.684 | 0.243 | 0.144782658237 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs755067124 | 0.401 | 0.076 | N | 0.684 | 0.243 | 0.144782658237 | gnomAD-4.0.0 | 3.09871E-06 | None | None | None | None | N | None | 4.00427E-05 | 0 | None | 0 | 2.22787E-05 | None | 0 | 0 | 8.47709E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3573 | ambiguous | 0.3601 | ambiguous | -0.416 | Destabilizing | 0.345 | N | 0.661 | neutral | None | None | None | None | N |
K/C | 0.7948 | likely_pathogenic | 0.7916 | pathogenic | -0.512 | Destabilizing | 0.977 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/D | 0.6865 | likely_pathogenic | 0.6919 | pathogenic | -0.083 | Destabilizing | 0.209 | N | 0.621 | neutral | None | None | None | None | N |
K/E | 0.223 | likely_benign | 0.2187 | benign | 0.038 | Stabilizing | 0.076 | N | 0.684 | prob.neutral | N | 0.443393892 | None | None | N |
K/F | 0.7725 | likely_pathogenic | 0.7667 | pathogenic | -0.062 | Destabilizing | 0.919 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.5198 | ambiguous | 0.5285 | ambiguous | -0.765 | Destabilizing | 0.209 | N | 0.647 | neutral | None | None | None | None | N |
K/H | 0.3756 | ambiguous | 0.3776 | ambiguous | -0.892 | Destabilizing | 0.649 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/I | 0.3136 | likely_benign | 0.3053 | benign | 0.482 | Stabilizing | 0.739 | D | 0.722 | prob.delet. | N | 0.450666581 | None | None | N |
K/L | 0.3693 | ambiguous | 0.372 | ambiguous | 0.482 | Stabilizing | 0.345 | N | 0.626 | neutral | None | None | None | None | N |
K/M | 0.2632 | likely_benign | 0.2637 | benign | 0.068 | Stabilizing | 0.977 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/N | 0.4083 | ambiguous | 0.4126 | ambiguous | -0.388 | Destabilizing | 0.001 | N | 0.471 | neutral | N | 0.467964263 | None | None | N |
K/P | 0.9022 | likely_pathogenic | 0.9153 | pathogenic | 0.212 | Stabilizing | 0.789 | D | 0.67 | neutral | None | None | None | None | N |
K/Q | 0.1654 | likely_benign | 0.1633 | benign | -0.36 | Destabilizing | 0.005 | N | 0.497 | neutral | N | 0.454765679 | None | None | N |
K/R | 0.0943 | likely_benign | 0.0938 | benign | -0.432 | Destabilizing | 0.166 | N | 0.668 | neutral | N | 0.432176821 | None | None | N |
K/S | 0.3831 | ambiguous | 0.3928 | ambiguous | -0.943 | Destabilizing | 0.209 | N | 0.662 | neutral | None | None | None | None | N |
K/T | 0.1501 | likely_benign | 0.1493 | benign | -0.618 | Destabilizing | 0.166 | N | 0.61 | neutral | N | 0.417089938 | None | None | N |
K/V | 0.2901 | likely_benign | 0.2883 | benign | 0.212 | Stabilizing | 0.789 | D | 0.665 | neutral | None | None | None | None | N |
K/W | 0.8312 | likely_pathogenic | 0.832 | pathogenic | -0.022 | Destabilizing | 0.977 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/Y | 0.6517 | likely_pathogenic | 0.6475 | pathogenic | 0.257 | Stabilizing | 0.919 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.