Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35442 | 106549;106550;106551 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
N2AB | 33801 | 101626;101627;101628 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
N2A | 32874 | 98845;98846;98847 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
N2B | 26377 | 79354;79355;79356 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
Novex-1 | 26502 | 79729;79730;79731 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
Novex-2 | 26569 | 79930;79931;79932 | chr2:178530291;178530290;178530289 | chr2:179395018;179395017;179395016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.001 | N | 0.202 | 0.171 | 0.134241683229 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
K/R | rs1688520726 | None | 0.192 | N | 0.428 | 0.087 | 0.223847106136 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4101 | ambiguous | 0.3969 | ambiguous | -0.685 | Destabilizing | 0.115 | N | 0.445 | neutral | None | None | None | None | N |
K/C | 0.8572 | likely_pathogenic | 0.8505 | pathogenic | -0.794 | Destabilizing | 0.981 | D | 0.575 | neutral | None | None | None | None | N |
K/D | 0.6517 | likely_pathogenic | 0.6333 | pathogenic | -0.014 | Destabilizing | 0.239 | N | 0.485 | neutral | None | None | None | None | N |
K/E | 0.1951 | likely_benign | 0.1785 | benign | 0.109 | Stabilizing | 0.001 | N | 0.202 | neutral | N | 0.464236964 | None | None | N |
K/F | 0.7579 | likely_pathogenic | 0.7573 | pathogenic | -0.365 | Destabilizing | 0.688 | D | 0.585 | neutral | None | None | None | None | N |
K/G | 0.6183 | likely_pathogenic | 0.6109 | pathogenic | -1.055 | Destabilizing | 0.386 | N | 0.541 | neutral | None | None | None | None | N |
K/H | 0.3904 | ambiguous | 0.3711 | ambiguous | -1.339 | Destabilizing | 0.002 | N | 0.259 | neutral | None | None | None | None | N |
K/I | 0.3168 | likely_benign | 0.3026 | benign | 0.277 | Stabilizing | 0.525 | D | 0.59 | neutral | None | None | None | None | N |
K/L | 0.3671 | ambiguous | 0.3587 | ambiguous | 0.277 | Stabilizing | 0.239 | N | 0.556 | neutral | None | None | None | None | N |
K/M | 0.227 | likely_benign | 0.2216 | benign | 0.125 | Stabilizing | 0.771 | D | 0.597 | neutral | D | 0.529155234 | None | None | N |
K/N | 0.3991 | ambiguous | 0.3803 | ambiguous | -0.499 | Destabilizing | 0.192 | N | 0.461 | neutral | N | 0.491404923 | None | None | N |
K/P | 0.9121 | likely_pathogenic | 0.9162 | pathogenic | -0.014 | Destabilizing | 0.817 | D | 0.59 | neutral | None | None | None | None | N |
K/Q | 0.1591 | likely_benign | 0.1488 | benign | -0.579 | Destabilizing | 0.006 | N | 0.315 | neutral | N | 0.469162781 | None | None | N |
K/R | 0.1087 | likely_benign | 0.1051 | benign | -0.586 | Destabilizing | 0.192 | N | 0.428 | neutral | N | 0.429913747 | None | None | N |
K/S | 0.4506 | ambiguous | 0.4397 | ambiguous | -1.248 | Destabilizing | 0.115 | N | 0.471 | neutral | None | None | None | None | N |
K/T | 0.1685 | likely_benign | 0.1582 | benign | -0.912 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.481686574 | None | None | N |
K/V | 0.3475 | ambiguous | 0.332 | benign | -0.014 | Destabilizing | 0.239 | N | 0.539 | neutral | None | None | None | None | N |
K/W | 0.8449 | likely_pathogenic | 0.8415 | pathogenic | -0.196 | Destabilizing | 0.981 | D | 0.594 | neutral | None | None | None | None | N |
K/Y | 0.6614 | likely_pathogenic | 0.6536 | pathogenic | 0.106 | Stabilizing | 0.525 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.