Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35452 | 106579;106580;106581 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
N2AB | 33811 | 101656;101657;101658 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
N2A | 32884 | 98875;98876;98877 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
N2B | 26387 | 79384;79385;79386 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
Novex-1 | 26512 | 79759;79760;79761 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
Novex-2 | 26579 | 79960;79961;79962 | chr2:178530261;178530260;178530259 | chr2:179394988;179394987;179394986 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.074 | N | 0.526 | 0.03 | 0.292062946507 | gnomAD-4.0.0 | 1.61619E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46675E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1641 | likely_benign | 0.1535 | benign | -1.276 | Destabilizing | 0.003 | N | 0.36 | neutral | None | None | None | None | N |
I/C | 0.5789 | likely_pathogenic | 0.5585 | ambiguous | -0.561 | Destabilizing | 0.177 | N | 0.535 | neutral | None | None | None | None | N |
I/D | 0.3023 | likely_benign | 0.2866 | benign | -0.67 | Destabilizing | 0.029 | N | 0.524 | neutral | None | None | None | None | N |
I/E | 0.255 | likely_benign | 0.2415 | benign | -0.722 | Destabilizing | 0.015 | N | 0.523 | neutral | None | None | None | None | N |
I/F | 0.1088 | likely_benign | 0.0993 | benign | -1.065 | Destabilizing | 0.022 | N | 0.497 | neutral | N | 0.492442286 | None | None | N |
I/G | 0.3873 | ambiguous | 0.3682 | ambiguous | -1.539 | Destabilizing | 0.006 | N | 0.481 | neutral | None | None | None | None | N |
I/H | 0.2894 | likely_benign | 0.2746 | benign | -0.844 | Destabilizing | 0.177 | N | 0.552 | neutral | None | None | None | None | N |
I/K | 0.2318 | likely_benign | 0.2183 | benign | -0.697 | Destabilizing | 0.015 | N | 0.525 | neutral | None | None | None | None | N |
I/L | 0.0984 | likely_benign | 0.0936 | benign | -0.659 | Destabilizing | 0.002 | N | 0.365 | neutral | N | 0.472163014 | None | None | N |
I/M | 0.1009 | likely_benign | 0.0946 | benign | -0.402 | Destabilizing | 0.074 | N | 0.526 | neutral | N | 0.489575339 | None | None | N |
I/N | 0.1067 | likely_benign | 0.1054 | benign | -0.36 | Destabilizing | 0.011 | N | 0.536 | neutral | N | 0.488881906 | None | None | N |
I/P | 0.7483 | likely_pathogenic | 0.7706 | pathogenic | -0.832 | Destabilizing | 0.058 | N | 0.546 | neutral | None | None | None | None | N |
I/Q | 0.2458 | likely_benign | 0.2302 | benign | -0.599 | Destabilizing | 0.096 | N | 0.596 | neutral | None | None | None | None | N |
I/R | 0.1749 | likely_benign | 0.1649 | benign | -0.108 | Destabilizing | 0.029 | N | 0.573 | neutral | None | None | None | None | N |
I/S | 0.117 | likely_benign | 0.1119 | benign | -0.9 | Destabilizing | None | N | 0.383 | neutral | N | 0.41082098 | None | None | N |
I/T | 0.0951 | likely_benign | 0.0886 | benign | -0.841 | Destabilizing | None | N | 0.299 | neutral | N | 0.379847499 | None | None | N |
I/V | 0.0728 | likely_benign | 0.0676 | benign | -0.832 | Destabilizing | None | N | 0.212 | neutral | N | 0.453595896 | None | None | N |
I/W | 0.6339 | likely_pathogenic | 0.6084 | pathogenic | -1.101 | Destabilizing | 0.712 | D | 0.572 | neutral | None | None | None | None | N |
I/Y | 0.3144 | likely_benign | 0.3044 | benign | -0.869 | Destabilizing | 0.177 | N | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.