Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35469 | 106630;106631;106632 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
N2AB | 33828 | 101707;101708;101709 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
N2A | 32901 | 98926;98927;98928 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
N2B | 26404 | 79435;79436;79437 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
Novex-1 | 26529 | 79810;79811;79812 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
Novex-2 | 26596 | 80011;80012;80013 | chr2:178530086;178530085;178530084 | chr2:179394813;179394812;179394811 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.82 | N | 0.451 | 0.43 | 0.36256342048 | gnomAD-4.0.0 | 3.20718E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73506E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0828 | likely_benign | 0.0816 | benign | -0.464 | Destabilizing | 0.019 | N | 0.204 | neutral | N | 0.486863108 | None | None | N |
S/C | 0.1808 | likely_benign | 0.1711 | benign | -0.298 | Destabilizing | 0.001 | N | 0.141 | neutral | N | 0.508409075 | None | None | N |
S/D | 0.3642 | ambiguous | 0.376 | ambiguous | 0.227 | Stabilizing | 0.633 | D | 0.251 | neutral | None | None | None | None | N |
S/E | 0.4205 | ambiguous | 0.4251 | ambiguous | 0.232 | Stabilizing | 0.633 | D | 0.25 | neutral | None | None | None | None | N |
S/F | 0.1347 | likely_benign | 0.1322 | benign | -0.567 | Destabilizing | None | N | 0.173 | neutral | N | 0.468933495 | None | None | N |
S/G | 0.1259 | likely_benign | 0.1283 | benign | -0.719 | Destabilizing | 0.103 | N | 0.291 | neutral | None | None | None | None | N |
S/H | 0.2957 | likely_benign | 0.2982 | benign | -1.107 | Destabilizing | 0.858 | D | 0.431 | neutral | None | None | None | None | N |
S/I | 0.1334 | likely_benign | 0.1358 | benign | 0.103 | Stabilizing | 0.218 | N | 0.455 | neutral | None | None | None | None | N |
S/K | 0.5455 | ambiguous | 0.5652 | pathogenic | -0.491 | Destabilizing | 0.362 | N | 0.252 | neutral | None | None | None | None | N |
S/L | 0.0829 | likely_benign | 0.0828 | benign | 0.103 | Stabilizing | 0.055 | N | 0.401 | neutral | None | None | None | None | N |
S/M | 0.1924 | likely_benign | 0.1948 | benign | 0.11 | Stabilizing | 0.858 | D | 0.441 | neutral | None | None | None | None | N |
S/N | 0.147 | likely_benign | 0.15 | benign | -0.411 | Destabilizing | 0.633 | D | 0.361 | neutral | None | None | None | None | N |
S/P | 0.6611 | likely_pathogenic | 0.6792 | pathogenic | -0.051 | Destabilizing | 0.82 | D | 0.451 | neutral | N | 0.489962425 | None | None | N |
S/Q | 0.4258 | ambiguous | 0.4413 | ambiguous | -0.474 | Destabilizing | 0.858 | D | 0.391 | neutral | None | None | None | None | N |
S/R | 0.4344 | ambiguous | 0.459 | ambiguous | -0.448 | Destabilizing | 0.858 | D | 0.453 | neutral | None | None | None | None | N |
S/T | 0.0714 | likely_benign | 0.0705 | benign | -0.434 | Destabilizing | 0.08 | N | 0.325 | neutral | N | 0.460329867 | None | None | N |
S/V | 0.1596 | likely_benign | 0.1591 | benign | -0.051 | Destabilizing | 0.055 | N | 0.439 | neutral | None | None | None | None | N |
S/W | 0.2266 | likely_benign | 0.2271 | benign | -0.608 | Destabilizing | 0.958 | D | 0.477 | neutral | None | None | None | None | N |
S/Y | 0.1494 | likely_benign | 0.1497 | benign | -0.315 | Destabilizing | 0.095 | N | 0.439 | neutral | N | 0.488596691 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.