Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35471 | 106636;106637;106638 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
N2AB | 33830 | 101713;101714;101715 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
N2A | 32903 | 98932;98933;98934 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
N2B | 26406 | 79441;79442;79443 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
Novex-1 | 26531 | 79816;79817;79818 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
Novex-2 | 26598 | 80017;80018;80019 | chr2:178530080;178530079;178530078 | chr2:179394807;179394806;179394805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | None | N | 0.097 | 0.127 | 0.241078983079 | gnomAD-4.0.0 | 6.86113E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00263E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1912 | likely_benign | 0.1675 | benign | -0.245 | Destabilizing | None | N | 0.124 | neutral | N | 0.512529556 | None | None | N |
D/C | 0.7189 | likely_pathogenic | 0.6791 | pathogenic | -0.045 | Destabilizing | 0.448 | N | 0.342 | neutral | None | None | None | None | N |
D/E | 0.1473 | likely_benign | 0.122 | benign | -0.225 | Destabilizing | None | N | 0.068 | neutral | N | 0.426852012 | None | None | N |
D/F | 0.5394 | ambiguous | 0.4924 | ambiguous | -0.154 | Destabilizing | 0.177 | N | 0.377 | neutral | None | None | None | None | N |
D/G | 0.1493 | likely_benign | 0.1275 | benign | -0.405 | Destabilizing | None | N | 0.108 | neutral | N | 0.515012501 | None | None | N |
D/H | 0.3203 | likely_benign | 0.2878 | benign | 0.189 | Stabilizing | 0.074 | N | 0.276 | neutral | D | 0.522997266 | None | None | N |
D/I | 0.3098 | likely_benign | 0.2915 | benign | 0.122 | Stabilizing | 0.096 | N | 0.45 | neutral | None | None | None | None | N |
D/K | 0.3095 | likely_benign | 0.2998 | benign | 0.468 | Stabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
D/L | 0.3844 | ambiguous | 0.358 | ambiguous | 0.122 | Stabilizing | 0.015 | N | 0.343 | neutral | None | None | None | None | N |
D/M | 0.5897 | likely_pathogenic | 0.545 | ambiguous | 0.137 | Stabilizing | 0.396 | N | 0.337 | neutral | None | None | None | None | N |
D/N | 0.1132 | likely_benign | 0.0988 | benign | 0.073 | Stabilizing | None | N | 0.097 | neutral | N | 0.457060276 | None | None | N |
D/P | 0.7856 | likely_pathogenic | 0.7435 | pathogenic | 0.02 | Stabilizing | 0.058 | N | 0.349 | neutral | None | None | None | None | N |
D/Q | 0.3177 | likely_benign | 0.2884 | benign | 0.111 | Stabilizing | 0.015 | N | 0.142 | neutral | None | None | None | None | N |
D/R | 0.3714 | ambiguous | 0.3564 | ambiguous | 0.633 | Stabilizing | 0.015 | N | 0.324 | neutral | None | None | None | None | N |
D/S | 0.1473 | likely_benign | 0.129 | benign | 0.008 | Stabilizing | 0.006 | N | 0.211 | neutral | None | None | None | None | N |
D/T | 0.248 | likely_benign | 0.2272 | benign | 0.146 | Stabilizing | 0.006 | N | 0.266 | neutral | None | None | None | None | N |
D/V | 0.1968 | likely_benign | 0.1838 | benign | 0.02 | Stabilizing | 0.011 | N | 0.349 | neutral | N | 0.514319068 | None | None | N |
D/W | 0.8303 | likely_pathogenic | 0.8171 | pathogenic | -0.013 | Destabilizing | 0.712 | D | 0.366 | neutral | None | None | None | None | N |
D/Y | 0.213 | likely_benign | 0.1991 | benign | 0.089 | Stabilizing | 0.331 | N | 0.376 | neutral | N | 0.505104166 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.