Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35472 | 106639;106640;106641 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
N2AB | 33831 | 101716;101717;101718 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
N2A | 32904 | 98935;98936;98937 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
N2B | 26407 | 79444;79445;79446 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
Novex-1 | 26532 | 79819;79820;79821 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
Novex-2 | 26599 | 80020;80021;80022 | chr2:178530077;178530076;178530075 | chr2:179394804;179394803;179394802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs776781963 | -0.043 | 0.001 | N | 0.117 | 0.111 | 0.0762999501168 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
K/N | rs776781963 | -0.043 | 0.001 | N | 0.117 | 0.111 | 0.0762999501168 | gnomAD-4.0.0 | 6.85476E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52576E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2187 | likely_benign | 0.2001 | benign | -0.032 | Destabilizing | 0.055 | N | 0.3 | neutral | None | None | None | None | N |
K/C | 0.7346 | likely_pathogenic | 0.7176 | pathogenic | -0.482 | Destabilizing | 0.958 | D | 0.256 | neutral | None | None | None | None | N |
K/D | 0.2937 | likely_benign | 0.2735 | benign | -0.263 | Destabilizing | 0.055 | N | 0.313 | neutral | None | None | None | None | N |
K/E | 0.1089 | likely_benign | 0.1017 | benign | -0.284 | Destabilizing | None | N | 0.145 | neutral | N | 0.415321857 | None | None | N |
K/F | 0.6861 | likely_pathogenic | 0.6534 | pathogenic | -0.402 | Destabilizing | 0.665 | D | 0.291 | neutral | None | None | None | None | N |
K/G | 0.2581 | likely_benign | 0.244 | benign | -0.144 | Destabilizing | 0.103 | N | 0.28 | neutral | None | None | None | None | N |
K/H | 0.3137 | likely_benign | 0.2898 | benign | -0.24 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
K/I | 0.3071 | likely_benign | 0.2746 | benign | 0.177 | Stabilizing | 0.665 | D | 0.317 | neutral | None | None | None | None | N |
K/L | 0.3272 | likely_benign | 0.2972 | benign | 0.177 | Stabilizing | 0.218 | N | 0.317 | neutral | None | None | None | None | N |
K/M | 0.2153 | likely_benign | 0.1941 | benign | -0.087 | Destabilizing | 0.82 | D | 0.298 | neutral | N | 0.495420223 | None | None | N |
K/N | 0.1997 | likely_benign | 0.1849 | benign | -0.015 | Destabilizing | 0.001 | N | 0.117 | neutral | N | 0.377688975 | None | None | N |
K/P | 0.5381 | ambiguous | 0.5182 | ambiguous | 0.13 | Stabilizing | 0.362 | N | 0.352 | neutral | None | None | None | None | N |
K/Q | 0.1325 | likely_benign | 0.1242 | benign | -0.175 | Destabilizing | 0.095 | N | 0.23 | neutral | N | 0.407185163 | None | None | N |
K/R | 0.0979 | likely_benign | 0.0942 | benign | -0.118 | Destabilizing | 0.08 | N | 0.259 | neutral | N | 0.457208551 | None | None | N |
K/S | 0.2271 | likely_benign | 0.2141 | benign | -0.402 | Destabilizing | 0.055 | N | 0.271 | neutral | None | None | None | None | N |
K/T | 0.1313 | likely_benign | 0.1192 | benign | -0.311 | Destabilizing | 0.174 | N | 0.287 | neutral | N | 0.43394769 | None | None | N |
K/V | 0.309 | likely_benign | 0.2808 | benign | 0.13 | Stabilizing | 0.218 | N | 0.327 | neutral | None | None | None | None | N |
K/W | 0.7657 | likely_pathogenic | 0.748 | pathogenic | -0.489 | Destabilizing | 0.958 | D | 0.261 | neutral | None | None | None | None | N |
K/Y | 0.5581 | ambiguous | 0.527 | ambiguous | -0.139 | Destabilizing | 0.218 | N | 0.353 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.