Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35475 | 106648;106649;106650 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
N2AB | 33834 | 101725;101726;101727 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
N2A | 32907 | 98944;98945;98946 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
N2B | 26410 | 79453;79454;79455 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
Novex-1 | 26535 | 79828;79829;79830 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
Novex-2 | 26602 | 80029;80030;80031 | chr2:178530068;178530067;178530066 | chr2:179394795;179394794;179394793 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.977 | N | 0.649 | 0.178 | 0.481246930725 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
F/I | rs377463445 | -1.712 | 0.802 | N | 0.565 | 0.146 | 0.271763555656 | gnomAD-2.1.1 | 1.54253E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 1.24211E-03 | None | 0 | 0 | 0 |
F/I | rs377463445 | -1.712 | 0.802 | N | 0.565 | 0.146 | 0.271763555656 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.65906E-03 | 0 |
F/I | rs377463445 | -1.712 | 0.802 | N | 0.565 | 0.146 | 0.271763555656 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
F/I | rs377463445 | -1.712 | 0.802 | N | 0.565 | 0.146 | 0.271763555656 | gnomAD-4.0.0 | 7.8827E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23424E-05 | None | 0 | 0 | 0 | 1.36515E-03 | 4.80754E-05 |
F/L | rs1445321656 | -1.712 | 0.451 | N | 0.473 | 0.155 | 0.187945064343 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
F/L | rs1445321656 | -1.712 | 0.451 | N | 0.473 | 0.155 | 0.187945064343 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/L | rs1445321656 | -1.712 | 0.451 | N | 0.473 | 0.155 | 0.187945064343 | gnomAD-4.0.0 | 6.57047E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
F/V | rs377463445 | -2.184 | 0.451 | N | 0.569 | 0.161 | 0.33835085245 | gnomAD-2.1.1 | 8.12E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
F/V | rs377463445 | -2.184 | 0.451 | N | 0.569 | 0.161 | 0.33835085245 | gnomAD-4.0.0 | 6.16861E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19958E-06 | 0 | 1.65876E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6486 | likely_pathogenic | 0.6431 | pathogenic | -2.555 | Highly Destabilizing | 0.005 | N | 0.57 | neutral | None | None | None | None | N |
F/C | 0.3696 | ambiguous | 0.346 | ambiguous | -1.287 | Destabilizing | 0.977 | D | 0.649 | neutral | N | 0.372784588 | None | None | N |
F/D | 0.8735 | likely_pathogenic | 0.8795 | pathogenic | -2.337 | Highly Destabilizing | 0.843 | D | 0.659 | neutral | None | None | None | None | N |
F/E | 0.9231 | likely_pathogenic | 0.924 | pathogenic | -2.157 | Highly Destabilizing | 0.522 | D | 0.636 | neutral | None | None | None | None | N |
F/G | 0.8354 | likely_pathogenic | 0.8333 | pathogenic | -2.958 | Highly Destabilizing | 0.353 | N | 0.651 | neutral | None | None | None | None | N |
F/H | 0.6567 | likely_pathogenic | 0.6501 | pathogenic | -1.388 | Destabilizing | 0.983 | D | 0.609 | neutral | None | None | None | None | N |
F/I | 0.1729 | likely_benign | 0.1643 | benign | -1.261 | Destabilizing | 0.802 | D | 0.565 | neutral | N | 0.443548608 | None | None | N |
F/K | 0.9157 | likely_pathogenic | 0.9212 | pathogenic | -1.402 | Destabilizing | 0.015 | N | 0.649 | neutral | None | None | None | None | N |
F/L | 0.7685 | likely_pathogenic | 0.7674 | pathogenic | -1.261 | Destabilizing | 0.451 | N | 0.473 | neutral | N | 0.440257587 | None | None | N |
F/M | 0.5505 | ambiguous | 0.5487 | ambiguous | -0.996 | Destabilizing | 0.983 | D | 0.604 | neutral | None | None | None | None | N |
F/N | 0.6768 | likely_pathogenic | 0.6804 | pathogenic | -1.706 | Destabilizing | 0.843 | D | 0.673 | neutral | None | None | None | None | N |
F/P | 0.9883 | likely_pathogenic | 0.9885 | pathogenic | -1.699 | Destabilizing | 0.843 | D | 0.676 | prob.neutral | None | None | None | None | N |
F/Q | 0.8724 | likely_pathogenic | 0.8725 | pathogenic | -1.712 | Destabilizing | 0.726 | D | 0.686 | prob.neutral | None | None | None | None | N |
F/R | 0.8346 | likely_pathogenic | 0.8418 | pathogenic | -0.939 | Destabilizing | 0.57 | D | 0.667 | neutral | None | None | None | None | N |
F/S | 0.5314 | ambiguous | 0.531 | ambiguous | -2.407 | Highly Destabilizing | 0.292 | N | 0.646 | neutral | N | 0.376630182 | None | None | N |
F/T | 0.6183 | likely_pathogenic | 0.6142 | pathogenic | -2.129 | Highly Destabilizing | 0.522 | D | 0.628 | neutral | None | None | None | None | N |
F/V | 0.2133 | likely_benign | 0.2011 | benign | -1.699 | Destabilizing | 0.451 | N | 0.569 | neutral | N | 0.442681816 | None | None | N |
F/W | 0.5313 | ambiguous | 0.5478 | ambiguous | -0.145 | Destabilizing | 0.995 | D | 0.621 | neutral | None | None | None | None | N |
F/Y | 0.1248 | likely_benign | 0.1176 | benign | -0.488 | Destabilizing | 0.925 | D | 0.585 | neutral | N | 0.410166753 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.