Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35481 | 106666;106667;106668 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
N2AB | 33840 | 101743;101744;101745 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
N2A | 32913 | 98962;98963;98964 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
N2B | 26416 | 79471;79472;79473 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
Novex-1 | 26541 | 79846;79847;79848 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
Novex-2 | 26608 | 80047;80048;80049 | chr2:178530050;178530049;178530048 | chr2:179394777;179394776;179394775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs200716018 | 0.253 | 0.157 | N | 0.337 | 0.135 | None | gnomAD-2.1.1 | 4.67E-05 | None | None | None | None | N | None | 8.28E-05 | 5.74E-05 | None | 0 | 0 | None | 0 | None | 0 | 6.26E-05 | 1.40964E-04 |
K/R | rs200716018 | 0.253 | 0.157 | N | 0.337 | 0.135 | None | gnomAD-3.1.2 | 1.05128E-04 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.20504E-04 | 0 | 0 |
K/R | rs200716018 | 0.253 | 0.157 | N | 0.337 | 0.135 | None | gnomAD-4.0.0 | 1.60703E-04 | None | None | None | None | N | None | 1.33618E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.00969E-04 | 0 | 3.36636E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2732 | likely_benign | 0.2801 | benign | -0.081 | Destabilizing | 0.049 | N | 0.371 | neutral | None | None | None | None | N |
K/C | 0.7447 | likely_pathogenic | 0.767 | pathogenic | -0.048 | Destabilizing | 0.953 | D | 0.348 | neutral | None | None | None | None | N |
K/D | 0.4062 | ambiguous | 0.4247 | ambiguous | 0.055 | Stabilizing | None | N | 0.128 | neutral | None | None | None | None | N |
K/E | 0.1162 | likely_benign | 0.1154 | benign | 0.084 | Stabilizing | None | N | 0.093 | neutral | N | 0.413111058 | None | None | N |
K/F | 0.7423 | likely_pathogenic | 0.7628 | pathogenic | -0.162 | Destabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | N |
K/G | 0.3212 | likely_benign | 0.3331 | benign | -0.343 | Destabilizing | 0.092 | N | 0.377 | neutral | None | None | None | None | N |
K/H | 0.3096 | likely_benign | 0.3517 | ambiguous | -0.751 | Destabilizing | 0.637 | D | 0.355 | neutral | None | None | None | None | N |
K/I | 0.3941 | ambiguous | 0.3941 | ambiguous | 0.547 | Stabilizing | 0.637 | D | 0.407 | neutral | None | None | None | None | N |
K/L | 0.3635 | ambiguous | 0.3722 | ambiguous | 0.547 | Stabilizing | 0.198 | N | 0.413 | neutral | None | None | None | None | N |
K/M | 0.2452 | likely_benign | 0.2568 | benign | 0.494 | Stabilizing | 0.801 | D | 0.355 | neutral | N | 0.484512583 | None | None | N |
K/N | 0.2713 | likely_benign | 0.2914 | benign | 0.248 | Stabilizing | 0.157 | N | 0.308 | neutral | N | 0.361775373 | None | None | N |
K/P | 0.7239 | likely_pathogenic | 0.6413 | pathogenic | 0.368 | Stabilizing | 0.334 | N | 0.411 | neutral | None | None | None | None | N |
K/Q | 0.1146 | likely_benign | 0.1252 | benign | 0.053 | Stabilizing | 0.085 | N | 0.33 | neutral | N | 0.431390174 | None | None | N |
K/R | 0.0927 | likely_benign | 0.0982 | benign | -0.089 | Destabilizing | 0.157 | N | 0.337 | neutral | N | 0.380942711 | None | None | N |
K/S | 0.2952 | likely_benign | 0.3068 | benign | -0.293 | Destabilizing | 0.049 | N | 0.367 | neutral | None | None | None | None | N |
K/T | 0.1646 | likely_benign | 0.1695 | benign | -0.096 | Destabilizing | 0.157 | N | 0.363 | neutral | N | 0.447994422 | None | None | N |
K/V | 0.3645 | ambiguous | 0.3726 | ambiguous | 0.368 | Stabilizing | 0.198 | N | 0.433 | neutral | None | None | None | None | N |
K/W | 0.8089 | likely_pathogenic | 0.8257 | pathogenic | -0.117 | Destabilizing | 0.953 | D | 0.414 | neutral | None | None | None | None | N |
K/Y | 0.6141 | likely_pathogenic | 0.6321 | pathogenic | 0.223 | Stabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.