Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35485 | 106678;106679;106680 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
N2AB | 33844 | 101755;101756;101757 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
N2A | 32917 | 98974;98975;98976 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
N2B | 26420 | 79483;79484;79485 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
Novex-1 | 26545 | 79858;79859;79860 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
Novex-2 | 26612 | 80059;80060;80061 | chr2:178530038;178530037;178530036 | chr2:179394765;179394764;179394763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.979 | N | 0.395 | 0.178 | 0.130388298395 | gnomAD-4.0.0 | 1.20038E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0676 | likely_benign | 0.0674 | benign | -0.368 | Destabilizing | 0.979 | D | 0.339 | neutral | N | 0.467465617 | None | None | N |
S/C | 0.2468 | likely_benign | 0.2084 | benign | -0.066 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.49809605 | None | None | N |
S/D | 0.3243 | likely_benign | 0.2789 | benign | 0.025 | Stabilizing | 0.993 | D | 0.433 | neutral | None | None | None | None | N |
S/E | 0.3945 | ambiguous | 0.344 | ambiguous | -0.084 | Destabilizing | 0.993 | D | 0.424 | neutral | None | None | None | None | N |
S/F | 0.1986 | likely_benign | 0.1779 | benign | -1.074 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | N | 0.46360906 | None | None | N |
S/G | 0.1131 | likely_benign | 0.0989 | benign | -0.443 | Destabilizing | 0.984 | D | 0.403 | neutral | None | None | None | None | N |
S/H | 0.4104 | ambiguous | 0.3506 | ambiguous | -0.955 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
S/I | 0.1727 | likely_benign | 0.1545 | benign | -0.296 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
S/K | 0.5586 | ambiguous | 0.4802 | ambiguous | -0.325 | Destabilizing | 0.993 | D | 0.426 | neutral | None | None | None | None | N |
S/L | 0.0976 | likely_benign | 0.0931 | benign | -0.296 | Destabilizing | 0.993 | D | 0.52 | neutral | None | None | None | None | N |
S/M | 0.2086 | likely_benign | 0.1952 | benign | 0.136 | Stabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
S/N | 0.1682 | likely_benign | 0.143 | benign | -0.003 | Destabilizing | 0.993 | D | 0.427 | neutral | None | None | None | None | N |
S/P | 0.2696 | likely_benign | 0.2568 | benign | -0.294 | Destabilizing | 0.997 | D | 0.615 | neutral | N | 0.463355571 | None | None | N |
S/Q | 0.4639 | ambiguous | 0.4161 | ambiguous | -0.311 | Destabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
S/R | 0.4862 | ambiguous | 0.4001 | ambiguous | -0.076 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
S/T | 0.0841 | likely_benign | 0.0812 | benign | -0.132 | Destabilizing | 0.979 | D | 0.395 | neutral | N | 0.488822325 | None | None | N |
S/V | 0.1755 | likely_benign | 0.1663 | benign | -0.294 | Destabilizing | 0.998 | D | 0.582 | neutral | None | None | None | None | N |
S/W | 0.3275 | likely_benign | 0.2895 | benign | -1.088 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
S/Y | 0.2138 | likely_benign | 0.1918 | benign | -0.8 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | N | 0.458342368 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.