Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35486 | 106681;106682;106683 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
N2AB | 33845 | 101758;101759;101760 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
N2A | 32918 | 98977;98978;98979 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
N2B | 26421 | 79486;79487;79488 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
Novex-1 | 26546 | 79861;79862;79863 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
Novex-2 | 26613 | 80062;80063;80064 | chr2:178530035;178530034;178530033 | chr2:179394762;179394761;179394760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.992 | D | 0.636 | 0.652 | 0.585473498874 | gnomAD-4.0.0 | 6.85896E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00161E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6269 | likely_pathogenic | 0.6625 | pathogenic | -0.133 | Destabilizing | 0.999 | D | 0.865 | deleterious | D | 0.615084073 | None | None | N |
D/C | 0.9201 | likely_pathogenic | 0.9215 | pathogenic | 0.024 | Stabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
D/E | 0.6011 | likely_pathogenic | 0.6158 | pathogenic | -0.882 | Destabilizing | 0.992 | D | 0.636 | neutral | D | 0.595067911 | None | None | N |
D/F | 0.9212 | likely_pathogenic | 0.9332 | pathogenic | 0.302 | Stabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
D/G | 0.6871 | likely_pathogenic | 0.7133 | pathogenic | -0.57 | Destabilizing | 0.997 | D | 0.787 | deleterious | D | 0.631537403 | None | None | N |
D/H | 0.7599 | likely_pathogenic | 0.763 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.584841948 | None | None | N |
D/I | 0.8394 | likely_pathogenic | 0.8634 | pathogenic | 1.049 | Stabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
D/K | 0.9113 | likely_pathogenic | 0.9098 | pathogenic | 0.105 | Stabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
D/L | 0.8707 | likely_pathogenic | 0.8894 | pathogenic | 1.049 | Stabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
D/M | 0.9516 | likely_pathogenic | 0.9582 | pathogenic | 1.579 | Stabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
D/N | 0.3449 | ambiguous | 0.3516 | ambiguous | -0.737 | Destabilizing | 0.997 | D | 0.744 | deleterious | D | 0.592342656 | None | None | N |
D/P | 0.9773 | likely_pathogenic | 0.9789 | pathogenic | 0.682 | Stabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
D/Q | 0.8673 | likely_pathogenic | 0.8671 | pathogenic | -0.44 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
D/R | 0.9193 | likely_pathogenic | 0.9189 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
D/S | 0.4312 | ambiguous | 0.4546 | ambiguous | -1.02 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/T | 0.7548 | likely_pathogenic | 0.7808 | pathogenic | -0.599 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
D/V | 0.6666 | likely_pathogenic | 0.7127 | pathogenic | 0.682 | Stabilizing | 0.999 | D | 0.887 | deleterious | D | 0.647960372 | None | None | N |
D/W | 0.9882 | likely_pathogenic | 0.9897 | pathogenic | 0.398 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
D/Y | 0.6677 | likely_pathogenic | 0.6872 | pathogenic | 0.591 | Stabilizing | 1.0 | D | 0.899 | deleterious | D | 0.647758568 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.