Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35488 | 106687;106688;106689 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
N2AB | 33847 | 101764;101765;101766 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
N2A | 32920 | 98983;98984;98985 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
N2B | 26423 | 79492;79493;79494 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
Novex-1 | 26548 | 79867;79868;79869 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
Novex-2 | 26615 | 80068;80069;80070 | chr2:178530029;178530028;178530027 | chr2:179394756;179394755;179394754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1478637421 | -0.598 | 1.0 | D | 0.837 | 0.725 | 0.844932034729 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.43E-05 | None | 0 | 0 | 0 |
G/R | rs1478637421 | -0.598 | 1.0 | D | 0.837 | 0.725 | 0.844932034729 | gnomAD-4.0.0 | 1.60066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46224E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3234 | likely_benign | 0.3083 | benign | -0.647 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | D | 0.545913315 | None | None | N |
G/C | 0.6903 | likely_pathogenic | 0.6879 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
G/D | 0.7824 | likely_pathogenic | 0.7653 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/E | 0.8194 | likely_pathogenic | 0.8091 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.639050624 | None | None | N |
G/F | 0.9343 | likely_pathogenic | 0.9376 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
G/H | 0.9214 | likely_pathogenic | 0.9212 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/I | 0.8532 | likely_pathogenic | 0.8577 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
G/K | 0.9236 | likely_pathogenic | 0.9218 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
G/L | 0.8853 | likely_pathogenic | 0.884 | pathogenic | -0.118 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/M | 0.9266 | likely_pathogenic | 0.9257 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
G/N | 0.8164 | likely_pathogenic | 0.8094 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
G/P | 0.9894 | likely_pathogenic | 0.9908 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
G/Q | 0.8599 | likely_pathogenic | 0.8582 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/R | 0.826 | likely_pathogenic | 0.8178 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.63884882 | None | None | N |
G/S | 0.2305 | likely_benign | 0.2191 | benign | -1.183 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
G/T | 0.6634 | likely_pathogenic | 0.6669 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
G/V | 0.7602 | likely_pathogenic | 0.7577 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.639050624 | None | None | N |
G/W | 0.9181 | likely_pathogenic | 0.9268 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
G/Y | 0.926 | likely_pathogenic | 0.9256 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.