Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35489 | 106690;106691;106692 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
N2AB | 33848 | 101767;101768;101769 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
N2A | 32921 | 98986;98987;98988 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
N2B | 26424 | 79495;79496;79497 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
Novex-1 | 26549 | 79870;79871;79872 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
Novex-2 | 26616 | 80071;80072;80073 | chr2:178530026;178530025;178530024 | chr2:179394753;179394752;179394751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | rs767087308 | -1.03 | 0.999 | N | 0.744 | 0.289 | 0.832902513328 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
L/H | rs767087308 | -1.03 | 0.999 | N | 0.744 | 0.289 | 0.832902513328 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/H | rs767087308 | -1.03 | 0.999 | N | 0.744 | 0.289 | 0.832902513328 | gnomAD-4.0.0 | 9.01121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.67834E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2535 | likely_benign | 0.2655 | benign | -1.38 | Destabilizing | 0.84 | D | 0.592 | neutral | None | None | None | None | N |
L/C | 0.6346 | likely_pathogenic | 0.5808 | pathogenic | -0.929 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/D | 0.4946 | ambiguous | 0.4976 | ambiguous | -0.398 | Destabilizing | 0.989 | D | 0.759 | deleterious | None | None | None | None | N |
L/E | 0.2906 | likely_benign | 0.2887 | benign | -0.42 | Destabilizing | 0.989 | D | 0.747 | deleterious | None | None | None | None | N |
L/F | 0.1403 | likely_benign | 0.1345 | benign | -1.126 | Destabilizing | 0.986 | D | 0.633 | neutral | N | 0.474107241 | None | None | N |
L/G | 0.4958 | ambiguous | 0.5097 | ambiguous | -1.66 | Destabilizing | 0.989 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/H | 0.2166 | likely_benign | 0.2051 | benign | -0.899 | Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.496021309 | None | None | N |
L/I | 0.0828 | likely_benign | 0.084 | benign | -0.707 | Destabilizing | 0.664 | D | 0.545 | neutral | N | 0.456193484 | None | None | N |
L/K | 0.2386 | likely_benign | 0.2402 | benign | -0.636 | Destabilizing | 0.989 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/M | 0.1451 | likely_benign | 0.1455 | benign | -0.532 | Destabilizing | 0.989 | D | 0.649 | neutral | None | None | None | None | N |
L/N | 0.2344 | likely_benign | 0.2442 | benign | -0.403 | Destabilizing | 0.989 | D | 0.759 | deleterious | None | None | None | None | N |
L/P | 0.4525 | ambiguous | 0.4677 | ambiguous | -0.899 | Destabilizing | 0.995 | D | 0.761 | deleterious | D | 0.528651015 | None | None | N |
L/Q | 0.16 | likely_benign | 0.1642 | benign | -0.61 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
L/R | 0.1845 | likely_benign | 0.1854 | benign | -0.128 | Destabilizing | 0.986 | D | 0.76 | deleterious | N | 0.432220546 | None | None | N |
L/S | 0.2145 | likely_benign | 0.2248 | benign | -1.101 | Destabilizing | 0.864 | D | 0.653 | neutral | None | None | None | None | N |
L/T | 0.1755 | likely_benign | 0.1823 | benign | -1.002 | Destabilizing | 0.145 | N | 0.348 | neutral | None | None | None | None | N |
L/V | 0.1051 | likely_benign | 0.1076 | benign | -0.899 | Destabilizing | 0.114 | N | 0.233 | neutral | N | 0.424313139 | None | None | N |
L/W | 0.2902 | likely_benign | 0.2683 | benign | -1.124 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
L/Y | 0.3167 | likely_benign | 0.2979 | benign | -0.87 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.