Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35496 | 106711;106712;106713 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
N2AB | 33855 | 101788;101789;101790 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
N2A | 32928 | 99007;99008;99009 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
N2B | 26431 | 79516;79517;79518 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
Novex-1 | 26556 | 79891;79892;79893 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
Novex-2 | 26623 | 80092;80093;80094 | chr2:178530005;178530004;178530003 | chr2:179394732;179394731;179394730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.997 | D | 0.67 | 0.413 | 0.191931220699 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9788 | likely_pathogenic | 0.976 | pathogenic | -0.619 | Destabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | N |
N/C | 0.9613 | likely_pathogenic | 0.96 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/D | 0.8709 | likely_pathogenic | 0.8587 | pathogenic | -1.536 | Destabilizing | 0.997 | D | 0.561 | neutral | D | 0.531192186 | None | None | N |
N/E | 0.9907 | likely_pathogenic | 0.99 | pathogenic | -1.466 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
N/F | 0.9959 | likely_pathogenic | 0.996 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/G | 0.9433 | likely_pathogenic | 0.9411 | pathogenic | -0.897 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
N/H | 0.9342 | likely_pathogenic | 0.926 | pathogenic | -0.796 | Destabilizing | 0.999 | D | 0.779 | deleterious | D | 0.543980523 | None | None | N |
N/I | 0.9623 | likely_pathogenic | 0.9609 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.801 | deleterious | D | 0.544234013 | None | None | N |
N/K | 0.9913 | likely_pathogenic | 0.9913 | pathogenic | -0.228 | Destabilizing | 0.997 | D | 0.67 | neutral | D | 0.543473544 | None | None | N |
N/L | 0.9595 | likely_pathogenic | 0.9617 | pathogenic | 0.065 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
N/M | 0.9775 | likely_pathogenic | 0.9778 | pathogenic | 0.625 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
N/P | 0.9952 | likely_pathogenic | 0.9946 | pathogenic | -0.135 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
N/Q | 0.9925 | likely_pathogenic | 0.9922 | pathogenic | -1.151 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
N/R | 0.9929 | likely_pathogenic | 0.9928 | pathogenic | -0.079 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
N/S | 0.6783 | likely_pathogenic | 0.6445 | pathogenic | -0.831 | Destabilizing | 0.997 | D | 0.567 | neutral | N | 0.478663393 | None | None | N |
N/T | 0.8454 | likely_pathogenic | 0.8279 | pathogenic | -0.609 | Destabilizing | 0.997 | D | 0.659 | neutral | N | 0.501985115 | None | None | N |
N/V | 0.9652 | likely_pathogenic | 0.9632 | pathogenic | -0.135 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
N/W | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/Y | 0.9456 | likely_pathogenic | 0.9439 | pathogenic | -0.245 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.543980523 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.