Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35505 | 106738;106739;106740 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
N2AB | 33864 | 101815;101816;101817 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
N2A | 32937 | 99034;99035;99036 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
N2B | 26440 | 79543;79544;79545 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
Novex-1 | 26565 | 79918;79919;79920 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
Novex-2 | 26632 | 80119;80120;80121 | chr2:178529978;178529977;178529976 | chr2:179394705;179394704;179394703 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2154132356 | None | 0.975 | N | 0.787 | 0.389 | 0.685049290349 | gnomAD-4.0.0 | 1.63721E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.54388E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5827 | likely_pathogenic | 0.5479 | ambiguous | -1.455 | Destabilizing | 0.177 | N | 0.432 | neutral | None | None | None | None | N |
C/D | 0.9802 | likely_pathogenic | 0.9788 | pathogenic | -0.114 | Destabilizing | 0.893 | D | 0.793 | deleterious | None | None | None | None | N |
C/E | 0.9888 | likely_pathogenic | 0.9886 | pathogenic | 0.032 | Stabilizing | 0.893 | D | 0.799 | deleterious | None | None | None | None | N |
C/F | 0.6453 | likely_pathogenic | 0.6529 | pathogenic | -1.079 | Destabilizing | 0.928 | D | 0.796 | deleterious | N | 0.463831532 | None | None | N |
C/G | 0.3103 | likely_benign | 0.2765 | benign | -1.767 | Destabilizing | 0.474 | N | 0.739 | prob.delet. | N | 0.428508237 | None | None | N |
C/H | 0.9481 | likely_pathogenic | 0.9435 | pathogenic | -2.02 | Highly Destabilizing | 0.995 | D | 0.806 | deleterious | None | None | None | None | N |
C/I | 0.8496 | likely_pathogenic | 0.859 | pathogenic | -0.652 | Destabilizing | 0.944 | D | 0.771 | deleterious | None | None | None | None | N |
C/K | 0.9874 | likely_pathogenic | 0.9865 | pathogenic | -0.304 | Destabilizing | 0.893 | D | 0.795 | deleterious | None | None | None | None | N |
C/L | 0.7956 | likely_pathogenic | 0.8054 | pathogenic | -0.652 | Destabilizing | 0.705 | D | 0.679 | prob.neutral | None | None | None | None | N |
C/M | 0.9104 | likely_pathogenic | 0.917 | pathogenic | -0.154 | Destabilizing | 0.981 | D | 0.763 | deleterious | None | None | None | None | N |
C/N | 0.9367 | likely_pathogenic | 0.9324 | pathogenic | -0.512 | Destabilizing | 0.893 | D | 0.8 | deleterious | None | None | None | None | N |
C/P | 0.9942 | likely_pathogenic | 0.9945 | pathogenic | -0.894 | Destabilizing | 0.944 | D | 0.819 | deleterious | None | None | None | None | N |
C/Q | 0.9615 | likely_pathogenic | 0.959 | pathogenic | -0.298 | Destabilizing | 0.893 | D | 0.825 | deleterious | None | None | None | None | N |
C/R | 0.9102 | likely_pathogenic | 0.9011 | pathogenic | -0.583 | Destabilizing | 0.863 | D | 0.821 | deleterious | N | 0.481996253 | None | None | N |
C/S | 0.5268 | ambiguous | 0.494 | ambiguous | -0.987 | Destabilizing | 0.024 | N | 0.373 | neutral | N | 0.469565426 | None | None | N |
C/T | 0.7739 | likely_pathogenic | 0.7732 | pathogenic | -0.64 | Destabilizing | 0.544 | D | 0.679 | prob.neutral | None | None | None | None | N |
C/V | 0.7453 | likely_pathogenic | 0.753 | pathogenic | -0.894 | Destabilizing | 0.705 | D | 0.702 | prob.neutral | None | None | None | None | N |
C/W | 0.9269 | likely_pathogenic | 0.928 | pathogenic | -1.175 | Destabilizing | 0.993 | D | 0.767 | deleterious | N | 0.493606048 | None | None | N |
C/Y | 0.8364 | likely_pathogenic | 0.8332 | pathogenic | -1.018 | Destabilizing | 0.975 | D | 0.787 | deleterious | N | 0.462004735 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.