Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35507 | 106744;106745;106746 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
N2AB | 33866 | 101821;101822;101823 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
N2A | 32939 | 99040;99041;99042 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
N2B | 26442 | 79549;79550;79551 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
Novex-1 | 26567 | 79924;79925;79926 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
Novex-2 | 26634 | 80125;80126;80127 | chr2:178529972;178529971;178529970 | chr2:179394699;179394698;179394697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.996 | N | 0.789 | 0.503 | 0.565865824572 | gnomAD-4.0.0 | 1.64877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8401 | likely_pathogenic | 0.8551 | pathogenic | -2.919 | Highly Destabilizing | 0.979 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/C | 0.8987 | likely_pathogenic | 0.9125 | pathogenic | -2.478 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/D | 0.9958 | likely_pathogenic | 0.9957 | pathogenic | -3.305 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
L/E | 0.9764 | likely_pathogenic | 0.9756 | pathogenic | -3.08 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.4231 | ambiguous | 0.4587 | ambiguous | -1.856 | Destabilizing | 0.996 | D | 0.789 | deleterious | N | 0.511084285 | None | None | N |
L/G | 0.9558 | likely_pathogenic | 0.9622 | pathogenic | -3.482 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
L/H | 0.9476 | likely_pathogenic | 0.9497 | pathogenic | -2.878 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/I | 0.1332 | likely_benign | 0.1349 | benign | -1.277 | Destabilizing | 0.877 | D | 0.636 | neutral | N | 0.474872093 | None | None | N |
L/K | 0.9614 | likely_pathogenic | 0.9608 | pathogenic | -2.308 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
L/M | 0.2279 | likely_benign | 0.2348 | benign | -1.293 | Destabilizing | 0.997 | D | 0.751 | deleterious | None | None | None | None | N |
L/N | 0.9744 | likely_pathogenic | 0.9746 | pathogenic | -2.688 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/P | 0.9878 | likely_pathogenic | 0.9889 | pathogenic | -1.807 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
L/Q | 0.9153 | likely_pathogenic | 0.9153 | pathogenic | -2.56 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
L/R | 0.9369 | likely_pathogenic | 0.9349 | pathogenic | -1.956 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
L/S | 0.9639 | likely_pathogenic | 0.9666 | pathogenic | -3.425 | Highly Destabilizing | 0.996 | D | 0.861 | deleterious | D | 0.541812293 | None | None | N |
L/T | 0.8857 | likely_pathogenic | 0.8911 | pathogenic | -3.046 | Highly Destabilizing | 0.979 | D | 0.789 | deleterious | None | None | None | None | N |
L/V | 0.1701 | likely_benign | 0.1677 | benign | -1.807 | Destabilizing | 0.316 | N | 0.333 | neutral | N | 0.48844947 | None | None | N |
L/W | 0.8483 | likely_pathogenic | 0.8713 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/Y | 0.8581 | likely_pathogenic | 0.8748 | pathogenic | -2.005 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.