Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35508 | 106747;106748;106749 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
N2AB | 33867 | 101824;101825;101826 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
N2A | 32940 | 99043;99044;99045 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
N2B | 26443 | 79552;79553;79554 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
Novex-1 | 26568 | 79927;79928;79929 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
Novex-2 | 26635 | 80128;80129;80130 | chr2:178529969;178529968;178529967 | chr2:179394696;179394695;179394694 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.785 | D | 0.531 | 0.179 | 0.326345978581 | gnomAD-4.0.0 | 6.94625E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0347E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1123 | likely_benign | 0.1134 | benign | -0.938 | Destabilizing | 0.426 | N | 0.561 | neutral | D | 0.529307163 | None | None | N |
T/C | 0.6523 | likely_pathogenic | 0.6657 | pathogenic | -0.64 | Destabilizing | 0.995 | D | 0.638 | neutral | None | None | None | None | N |
T/D | 0.3751 | ambiguous | 0.3792 | ambiguous | -0.381 | Destabilizing | 0.981 | D | 0.589 | neutral | None | None | None | None | N |
T/E | 0.3059 | likely_benign | 0.3066 | benign | -0.37 | Destabilizing | 0.981 | D | 0.593 | neutral | None | None | None | None | N |
T/F | 0.253 | likely_benign | 0.2475 | benign | -0.973 | Destabilizing | 0.893 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/G | 0.3517 | ambiguous | 0.3759 | ambiguous | -1.203 | Destabilizing | 0.944 | D | 0.627 | neutral | None | None | None | None | N |
T/H | 0.2824 | likely_benign | 0.2819 | benign | -1.472 | Destabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/I | 0.1651 | likely_benign | 0.1566 | benign | -0.319 | Destabilizing | 0.006 | N | 0.414 | neutral | N | 0.485442975 | None | None | N |
T/K | 0.2338 | likely_benign | 0.2265 | benign | -0.769 | Destabilizing | 0.928 | D | 0.593 | neutral | D | 0.52459199 | None | None | N |
T/L | 0.1265 | likely_benign | 0.1303 | benign | -0.319 | Destabilizing | 0.145 | N | 0.545 | neutral | None | None | None | None | N |
T/M | 0.107 | likely_benign | 0.1135 | benign | 0.001 | Stabilizing | 0.893 | D | 0.669 | neutral | None | None | None | None | N |
T/N | 0.1342 | likely_benign | 0.1337 | benign | -0.731 | Destabilizing | 0.981 | D | 0.563 | neutral | None | None | None | None | N |
T/P | 0.477 | ambiguous | 0.4943 | ambiguous | -0.494 | Destabilizing | 0.975 | D | 0.665 | neutral | D | 0.538136352 | None | None | N |
T/Q | 0.2413 | likely_benign | 0.2417 | benign | -0.929 | Destabilizing | 0.981 | D | 0.673 | neutral | None | None | None | None | N |
T/R | 0.1859 | likely_benign | 0.1809 | benign | -0.541 | Destabilizing | 0.928 | D | 0.669 | neutral | D | 0.527653724 | None | None | N |
T/S | 0.1331 | likely_benign | 0.1395 | benign | -1.039 | Destabilizing | 0.785 | D | 0.531 | neutral | D | 0.525440138 | None | None | N |
T/V | 0.1663 | likely_benign | 0.1583 | benign | -0.494 | Destabilizing | 0.145 | N | 0.489 | neutral | None | None | None | None | N |
T/W | 0.6174 | likely_pathogenic | 0.6284 | pathogenic | -0.868 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/Y | 0.3204 | likely_benign | 0.3213 | benign | -0.642 | Destabilizing | 0.944 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.