Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35509 | 106750;106751;106752 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
N2AB | 33868 | 101827;101828;101829 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
N2A | 32941 | 99046;99047;99048 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
N2B | 26444 | 79555;79556;79557 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
Novex-1 | 26569 | 79930;79931;79932 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
Novex-2 | 26636 | 80131;80132;80133 | chr2:178529966;178529965;178529964 | chr2:179394693;179394692;179394691 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1447572736 | -1.983 | 0.322 | N | 0.547 | 0.574 | 0.70956276702 | gnomAD-2.1.1 | 4.43E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.36E-06 | 0 |
I/T | rs1447572736 | -1.983 | 0.322 | N | 0.547 | 0.574 | 0.70956276702 | gnomAD-4.0.0 | 7.65311E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.94406E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5959 | likely_pathogenic | 0.6126 | pathogenic | -1.565 | Destabilizing | 0.115 | N | 0.55 | neutral | None | None | None | None | N |
I/C | 0.897 | likely_pathogenic | 0.9011 | pathogenic | -1.653 | Destabilizing | 0.981 | D | 0.619 | neutral | None | None | None | None | N |
I/D | 0.9577 | likely_pathogenic | 0.9602 | pathogenic | -1.837 | Destabilizing | 0.932 | D | 0.667 | neutral | None | None | None | None | N |
I/E | 0.8843 | likely_pathogenic | 0.8905 | pathogenic | -1.838 | Destabilizing | 0.817 | D | 0.647 | neutral | None | None | None | None | N |
I/F | 0.3619 | ambiguous | 0.4006 | ambiguous | -1.448 | Destabilizing | 0.525 | D | 0.475 | neutral | None | None | None | None | N |
I/G | 0.8639 | likely_pathogenic | 0.8744 | pathogenic | -1.827 | Destabilizing | 0.817 | D | 0.642 | neutral | None | None | None | None | N |
I/H | 0.9051 | likely_pathogenic | 0.9222 | pathogenic | -1.086 | Destabilizing | 0.981 | D | 0.656 | neutral | None | None | None | None | N |
I/K | 0.8017 | likely_pathogenic | 0.8354 | pathogenic | -1.058 | Destabilizing | 0.771 | D | 0.631 | neutral | D | 0.52671173 | None | None | N |
I/L | 0.1807 | likely_benign | 0.1932 | benign | -0.914 | Destabilizing | 0.001 | N | 0.344 | neutral | D | 0.537508146 | None | None | N |
I/M | 0.1782 | likely_benign | 0.194 | benign | -0.935 | Destabilizing | 0.624 | D | 0.525 | neutral | N | 0.514848445 | None | None | N |
I/N | 0.7026 | likely_pathogenic | 0.7155 | pathogenic | -1.069 | Destabilizing | 0.932 | D | 0.667 | neutral | None | None | None | None | N |
I/P | 0.9365 | likely_pathogenic | 0.9281 | pathogenic | -1.104 | Destabilizing | 0.932 | D | 0.669 | neutral | None | None | None | None | N |
I/Q | 0.8216 | likely_pathogenic | 0.8466 | pathogenic | -1.344 | Destabilizing | 0.932 | D | 0.665 | neutral | None | None | None | None | N |
I/R | 0.7381 | likely_pathogenic | 0.78 | pathogenic | -0.522 | Destabilizing | 0.771 | D | 0.662 | neutral | D | 0.52671173 | None | None | N |
I/S | 0.6526 | likely_pathogenic | 0.6747 | pathogenic | -1.62 | Destabilizing | 0.688 | D | 0.607 | neutral | None | None | None | None | N |
I/T | 0.5799 | likely_pathogenic | 0.6027 | pathogenic | -1.513 | Destabilizing | 0.322 | N | 0.547 | neutral | N | 0.508100496 | None | None | N |
I/V | 0.0828 | likely_benign | 0.0811 | benign | -1.104 | Destabilizing | 0.001 | N | 0.348 | neutral | N | 0.393517724 | None | None | N |
I/W | 0.9289 | likely_pathogenic | 0.945 | pathogenic | -1.491 | Destabilizing | 0.981 | D | 0.662 | neutral | None | None | None | None | N |
I/Y | 0.7973 | likely_pathogenic | 0.8306 | pathogenic | -1.173 | Destabilizing | 0.817 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.