Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35610 | 107053;107054;107055 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
N2AB | 33969 | 102130;102131;102132 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
N2A | 33042 | 99349;99350;99351 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
N2B | 26545 | 79858;79859;79860 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
Novex-1 | 26670 | 80233;80234;80235 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
Novex-2 | 26737 | 80434;80435;80436 | chr2:178528923;178528922;178528921 | chr2:179393650;179393649;179393648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs753984036 | -0.123 | 0.684 | N | 0.392 | 0.312 | 0.273503213844 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 1.65399E-04 |
K/E | rs753984036 | -0.123 | 0.684 | N | 0.392 | 0.312 | 0.273503213844 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
K/E | rs753984036 | -0.123 | 0.684 | N | 0.392 | 0.312 | 0.273503213844 | gnomAD-4.0.0 | 3.53176E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.66144E-05 | 0 | 3.20184E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5095 | ambiguous | 0.4348 | ambiguous | -0.124 | Destabilizing | 0.373 | N | 0.385 | neutral | None | None | None | None | N |
K/C | 0.9134 | likely_pathogenic | 0.8859 | pathogenic | -0.674 | Destabilizing | 0.996 | D | 0.429 | neutral | None | None | None | None | N |
K/D | 0.7401 | likely_pathogenic | 0.68 | pathogenic | -0.324 | Destabilizing | 0.742 | D | 0.401 | neutral | None | None | None | None | N |
K/E | 0.2464 | likely_benign | 0.2073 | benign | -0.321 | Destabilizing | 0.684 | D | 0.392 | neutral | N | 0.472989733 | None | None | N |
K/F | 0.8959 | likely_pathogenic | 0.8604 | pathogenic | -0.505 | Destabilizing | 0.953 | D | 0.417 | neutral | None | None | None | None | N |
K/G | 0.6814 | likely_pathogenic | 0.6146 | pathogenic | -0.238 | Destabilizing | 0.742 | D | 0.383 | neutral | None | None | None | None | N |
K/H | 0.4805 | ambiguous | 0.4403 | ambiguous | -0.269 | Destabilizing | 0.953 | D | 0.393 | neutral | None | None | None | None | N |
K/I | 0.5096 | ambiguous | 0.4305 | ambiguous | 0.099 | Stabilizing | 0.884 | D | 0.433 | neutral | N | 0.4743766 | None | None | N |
K/L | 0.5124 | ambiguous | 0.4421 | ambiguous | 0.099 | Stabilizing | 0.59 | D | 0.396 | neutral | None | None | None | None | N |
K/M | 0.3616 | ambiguous | 0.2957 | benign | -0.385 | Destabilizing | 0.953 | D | 0.393 | neutral | None | None | None | None | N |
K/N | 0.5487 | ambiguous | 0.4915 | ambiguous | -0.245 | Destabilizing | 0.684 | D | 0.381 | neutral | N | 0.474549958 | None | None | N |
K/P | 0.8216 | likely_pathogenic | 0.7723 | pathogenic | 0.046 | Stabilizing | 0.953 | D | 0.414 | neutral | None | None | None | None | N |
K/Q | 0.1945 | likely_benign | 0.1773 | benign | -0.309 | Destabilizing | 0.684 | D | 0.422 | neutral | N | 0.474029883 | None | None | N |
K/R | 0.1204 | likely_benign | 0.1136 | benign | -0.159 | Destabilizing | 0.003 | N | 0.093 | neutral | N | 0.455617481 | None | None | N |
K/S | 0.5731 | likely_pathogenic | 0.5103 | ambiguous | -0.563 | Destabilizing | 0.59 | D | 0.369 | neutral | None | None | None | None | N |
K/T | 0.2441 | likely_benign | 0.2035 | benign | -0.444 | Destabilizing | 0.003 | N | 0.181 | neutral | N | 0.453710539 | None | None | N |
K/V | 0.5159 | ambiguous | 0.4369 | ambiguous | 0.046 | Stabilizing | 0.59 | D | 0.411 | neutral | None | None | None | None | N |
K/W | 0.9215 | likely_pathogenic | 0.8961 | pathogenic | -0.647 | Destabilizing | 0.996 | D | 0.543 | neutral | None | None | None | None | N |
K/Y | 0.8297 | likely_pathogenic | 0.7842 | pathogenic | -0.299 | Destabilizing | 0.984 | D | 0.385 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.