Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35620 | 107083;107084;107085 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
N2AB | 33979 | 102160;102161;102162 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
N2A | 33052 | 99379;99380;99381 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
N2B | 26555 | 79888;79889;79890 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
Novex-1 | 26680 | 80263;80264;80265 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
Novex-2 | 26747 | 80464;80465;80466 | chr2:178528893;178528892;178528891 | chr2:179393620;179393619;179393618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs377593605 | -0.035 | 0.001 | N | 0.133 | 0.057 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 2.66E-05 | 0 |
E/K | rs377593605 | -0.035 | 0.001 | N | 0.133 | 0.057 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 1.20604E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs377593605 | -0.035 | 0.001 | N | 0.133 | 0.057 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs377593605 | -0.035 | 0.001 | N | 0.133 | 0.057 | None | gnomAD-4.0.0 | 1.48699E-05 | None | None | None | None | N | None | 6.66134E-05 | 0 | None | 0 | 2.22777E-05 | None | 0 | 0 | 1.18657E-05 | 4.39155E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1402 | likely_benign | 0.1427 | benign | -0.266 | Destabilizing | None | N | 0.133 | neutral | N | 0.448341139 | None | None | N |
E/C | 0.8572 | likely_pathogenic | 0.8677 | pathogenic | 0.126 | Stabilizing | 0.676 | D | 0.369 | neutral | None | None | None | None | N |
E/D | 0.1008 | likely_benign | 0.0965 | benign | -0.222 | Destabilizing | None | N | 0.096 | neutral | N | 0.431913036 | None | None | N |
E/F | 0.7577 | likely_pathogenic | 0.7728 | pathogenic | -0.209 | Destabilizing | 0.356 | N | 0.393 | neutral | None | None | None | None | N |
E/G | 0.1514 | likely_benign | 0.1437 | benign | -0.451 | Destabilizing | 0.012 | N | 0.371 | neutral | N | 0.450941514 | None | None | N |
E/H | 0.4043 | ambiguous | 0.4114 | ambiguous | 0.004 | Stabilizing | 0.356 | N | 0.342 | neutral | None | None | None | None | N |
E/I | 0.4142 | ambiguous | 0.4076 | ambiguous | 0.182 | Stabilizing | 0.214 | N | 0.422 | neutral | None | None | None | None | N |
E/K | 0.11 | likely_benign | 0.1133 | benign | 0.499 | Stabilizing | 0.001 | N | 0.133 | neutral | N | 0.449901364 | None | None | N |
E/L | 0.4807 | ambiguous | 0.4652 | ambiguous | 0.182 | Stabilizing | 0.038 | N | 0.413 | neutral | None | None | None | None | N |
E/M | 0.5386 | ambiguous | 0.5381 | ambiguous | 0.293 | Stabilizing | 0.356 | N | 0.35 | neutral | None | None | None | None | N |
E/N | 0.2019 | likely_benign | 0.1989 | benign | 0.212 | Stabilizing | 0.038 | N | 0.24 | neutral | None | None | None | None | N |
E/P | 0.4239 | ambiguous | 0.4026 | ambiguous | 0.053 | Stabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | N |
E/Q | 0.1544 | likely_benign | 0.1544 | benign | 0.244 | Stabilizing | 0.006 | N | 0.245 | neutral | N | 0.431566319 | None | None | N |
E/R | 0.1965 | likely_benign | 0.203 | benign | 0.631 | Stabilizing | 0.038 | N | 0.26 | neutral | None | None | None | None | N |
E/S | 0.1583 | likely_benign | 0.1546 | benign | 0.053 | Stabilizing | 0.001 | N | 0.13 | neutral | None | None | None | None | N |
E/T | 0.2141 | likely_benign | 0.2135 | benign | 0.207 | Stabilizing | 0.038 | N | 0.321 | neutral | None | None | None | None | N |
E/V | 0.2569 | likely_benign | 0.2484 | benign | 0.053 | Stabilizing | 0.029 | N | 0.387 | neutral | N | 0.447994422 | None | None | N |
E/W | 0.8865 | likely_pathogenic | 0.8884 | pathogenic | -0.087 | Destabilizing | 0.864 | D | 0.459 | neutral | None | None | None | None | N |
E/Y | 0.588 | likely_pathogenic | 0.5743 | pathogenic | 0.038 | Stabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.