Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35623 | 107092;107093;107094 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
N2AB | 33982 | 102169;102170;102171 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
N2A | 33055 | 99388;99389;99390 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
N2B | 26558 | 79897;79898;79899 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
Novex-1 | 26683 | 80272;80273;80274 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
Novex-2 | 26750 | 80473;80474;80475 | chr2:178528884;178528883;178528882 | chr2:179393611;179393610;179393609 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs777105439 | 0.369 | 0.033 | N | 0.53 | 0.088 | 0.215109475489 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11297E-04 | None | 0 | None | 0 | 0 | 0 |
R/S | None | None | None | N | 0.159 | 0.056 | 0.0954503805726 | gnomAD-4.0.0 | 6.84143E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.994E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3494 | ambiguous | 0.2913 | benign | -0.226 | Destabilizing | 0.002 | N | 0.275 | neutral | None | None | None | None | N |
R/C | 0.2853 | likely_benign | 0.2451 | benign | -0.302 | Destabilizing | 0.497 | N | 0.443 | neutral | None | None | None | None | N |
R/D | 0.5771 | likely_pathogenic | 0.5164 | ambiguous | 0.092 | Stabilizing | 0.018 | N | 0.367 | neutral | None | None | None | None | N |
R/E | 0.2995 | likely_benign | 0.2626 | benign | 0.202 | Stabilizing | 0.004 | N | 0.231 | neutral | None | None | None | None | N |
R/F | 0.5738 | likely_pathogenic | 0.5299 | ambiguous | -0.168 | Destabilizing | 0.497 | N | 0.547 | neutral | None | None | None | None | N |
R/G | 0.2127 | likely_benign | 0.1755 | benign | -0.506 | Destabilizing | 0.006 | N | 0.335 | neutral | N | 0.427752436 | None | None | N |
R/H | 0.1294 | likely_benign | 0.1205 | benign | -0.904 | Destabilizing | 0.245 | N | 0.387 | neutral | None | None | None | None | N |
R/I | 0.2012 | likely_benign | 0.1941 | benign | 0.504 | Stabilizing | 0.033 | N | 0.53 | neutral | N | 0.428099153 | None | None | N |
R/K | 0.0743 | likely_benign | 0.0685 | benign | -0.273 | Destabilizing | None | N | 0.091 | neutral | N | 0.389714123 | None | None | N |
R/L | 0.241 | likely_benign | 0.2088 | benign | 0.504 | Stabilizing | 0.008 | N | 0.333 | neutral | None | None | None | None | N |
R/M | 0.2123 | likely_benign | 0.1866 | benign | 0.009 | Stabilizing | 0.497 | N | 0.437 | neutral | None | None | None | None | N |
R/N | 0.4154 | ambiguous | 0.3619 | ambiguous | 0.072 | Stabilizing | 0.018 | N | 0.282 | neutral | None | None | None | None | N |
R/P | 0.5316 | ambiguous | 0.36 | ambiguous | 0.283 | Stabilizing | 0.037 | N | 0.439 | neutral | None | None | None | None | N |
R/Q | 0.1152 | likely_benign | 0.1045 | benign | -0.021 | Destabilizing | 0.009 | N | 0.331 | neutral | None | None | None | None | N |
R/S | 0.3353 | likely_benign | 0.2765 | benign | -0.474 | Destabilizing | None | N | 0.159 | neutral | N | 0.406219584 | None | None | N |
R/T | 0.175 | likely_benign | 0.1494 | benign | -0.194 | Destabilizing | None | N | 0.159 | neutral | N | 0.406392942 | None | None | N |
R/V | 0.3114 | likely_benign | 0.2782 | benign | 0.283 | Stabilizing | 0.018 | N | 0.375 | neutral | None | None | None | None | N |
R/W | 0.2499 | likely_benign | 0.2298 | benign | -0.018 | Destabilizing | 0.788 | D | 0.437 | neutral | None | None | None | None | N |
R/Y | 0.4168 | ambiguous | 0.3754 | ambiguous | 0.334 | Stabilizing | 0.085 | N | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.