Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35625 | 107098;107099;107100 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
N2AB | 33984 | 102175;102176;102177 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
N2A | 33057 | 99394;99395;99396 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
N2B | 26560 | 79903;79904;79905 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
Novex-1 | 26685 | 80278;80279;80280 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
Novex-2 | 26752 | 80479;80480;80481 | chr2:178528878;178528877;178528876 | chr2:179393605;179393604;179393603 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1687747331 | None | 0.001 | N | 0.419 | 0.108 | 0.19670166235 | gnomAD-4.0.0 | 1.59091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85758E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1512 | likely_benign | 0.1543 | benign | -0.945 | Destabilizing | None | N | 0.247 | neutral | N | 0.410553542 | None | None | N |
V/C | 0.716 | likely_pathogenic | 0.741 | pathogenic | -0.784 | Destabilizing | 0.356 | N | 0.473 | neutral | None | None | None | None | N |
V/D | 0.2528 | likely_benign | 0.2754 | benign | -0.653 | Destabilizing | 0.055 | N | 0.483 | neutral | N | 0.410900259 | None | None | N |
V/E | 0.2238 | likely_benign | 0.2308 | benign | -0.701 | Destabilizing | 0.031 | N | 0.447 | neutral | None | None | None | None | N |
V/F | 0.1508 | likely_benign | 0.1504 | benign | -0.789 | Destabilizing | 0.055 | N | 0.503 | neutral | N | 0.4107269 | None | None | N |
V/G | 0.2286 | likely_benign | 0.2416 | benign | -1.187 | Destabilizing | 0.012 | N | 0.419 | neutral | N | 0.411073617 | None | None | N |
V/H | 0.4269 | ambiguous | 0.4289 | ambiguous | -0.633 | Destabilizing | 0.628 | D | 0.51 | neutral | None | None | None | None | N |
V/I | 0.0788 | likely_benign | 0.0772 | benign | -0.415 | Destabilizing | 0.012 | N | 0.374 | neutral | N | 0.40968675 | None | None | N |
V/K | 0.2904 | likely_benign | 0.2985 | benign | -0.868 | Destabilizing | 0.031 | N | 0.444 | neutral | None | None | None | None | N |
V/L | 0.1582 | likely_benign | 0.1531 | benign | -0.415 | Destabilizing | 0.001 | N | 0.419 | neutral | N | 0.409513392 | None | None | N |
V/M | 0.1363 | likely_benign | 0.1341 | benign | -0.436 | Destabilizing | 0.003 | N | 0.342 | neutral | None | None | None | None | N |
V/N | 0.1765 | likely_benign | 0.1781 | benign | -0.64 | Destabilizing | 0.072 | N | 0.483 | neutral | None | None | None | None | N |
V/P | 0.5835 | likely_pathogenic | 0.6487 | pathogenic | -0.555 | Destabilizing | 0.136 | N | 0.513 | neutral | None | None | None | None | N |
V/Q | 0.2486 | likely_benign | 0.2461 | benign | -0.826 | Destabilizing | 0.136 | N | 0.523 | neutral | None | None | None | None | N |
V/R | 0.2575 | likely_benign | 0.2656 | benign | -0.324 | Destabilizing | 0.072 | N | 0.51 | neutral | None | None | None | None | N |
V/S | 0.1423 | likely_benign | 0.1434 | benign | -1.096 | Destabilizing | 0.007 | N | 0.4 | neutral | None | None | None | None | N |
V/T | 0.0915 | likely_benign | 0.0912 | benign | -1.031 | Destabilizing | None | N | 0.229 | neutral | None | None | None | None | N |
V/W | 0.7499 | likely_pathogenic | 0.7461 | pathogenic | -0.912 | Destabilizing | 0.864 | D | 0.521 | neutral | None | None | None | None | N |
V/Y | 0.4615 | ambiguous | 0.4529 | ambiguous | -0.628 | Destabilizing | 0.356 | N | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.