Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35627 | 107104;107105;107106 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
N2AB | 33986 | 102181;102182;102183 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
N2A | 33059 | 99400;99401;99402 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
N2B | 26562 | 79909;79910;79911 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
Novex-1 | 26687 | 80284;80285;80286 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
Novex-2 | 26754 | 80485;80486;80487 | chr2:178528872;178528871;178528870 | chr2:179393599;179393598;179393597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1284079251 | None | 0.003 | N | 0.254 | 0.085 | 0.309530620856 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1284079251 | None | 0.003 | N | 0.254 | 0.085 | 0.309530620856 | gnomAD-4.0.0 | 6.56935E-06 | None | None | None | None | N | None | 2.41173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7085 | likely_pathogenic | 0.7293 | pathogenic | -0.396 | Destabilizing | 0.415 | N | 0.468 | neutral | None | None | None | None | N |
K/C | 0.9379 | likely_pathogenic | 0.9397 | pathogenic | -0.387 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/D | 0.8695 | likely_pathogenic | 0.893 | pathogenic | -0.093 | Destabilizing | 0.775 | D | 0.53 | neutral | None | None | None | None | N |
K/E | 0.4007 | ambiguous | 0.4318 | ambiguous | -0.039 | Destabilizing | 0.565 | D | 0.513 | neutral | N | 0.472643017 | None | None | N |
K/F | 0.9428 | likely_pathogenic | 0.9518 | pathogenic | -0.407 | Destabilizing | 0.987 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/G | 0.8234 | likely_pathogenic | 0.8461 | pathogenic | -0.698 | Destabilizing | 0.775 | D | 0.555 | neutral | None | None | None | None | N |
K/H | 0.5166 | ambiguous | 0.5228 | ambiguous | -1.129 | Destabilizing | 0.961 | D | 0.633 | neutral | None | None | None | None | N |
K/I | 0.6973 | likely_pathogenic | 0.721 | pathogenic | 0.351 | Stabilizing | 0.949 | D | 0.673 | neutral | N | 0.475763467 | None | None | N |
K/L | 0.6986 | likely_pathogenic | 0.7199 | pathogenic | 0.351 | Stabilizing | 0.775 | D | 0.567 | neutral | None | None | None | None | N |
K/M | 0.4924 | ambiguous | 0.5218 | ambiguous | 0.409 | Stabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
K/N | 0.6748 | likely_pathogenic | 0.7125 | pathogenic | -0.143 | Destabilizing | 0.722 | D | 0.483 | neutral | N | 0.473683167 | None | None | N |
K/P | 0.947 | likely_pathogenic | 0.9607 | pathogenic | 0.132 | Stabilizing | 0.961 | D | 0.595 | neutral | None | None | None | None | N |
K/Q | 0.2493 | likely_benign | 0.2582 | benign | -0.348 | Destabilizing | 0.722 | D | 0.535 | neutral | N | 0.474029883 | None | None | N |
K/R | 0.1272 | likely_benign | 0.1288 | benign | -0.364 | Destabilizing | 0.003 | N | 0.254 | neutral | N | 0.456137556 | None | None | N |
K/S | 0.7128 | likely_pathogenic | 0.7439 | pathogenic | -0.781 | Destabilizing | 0.118 | N | 0.383 | neutral | None | None | None | None | N |
K/T | 0.3515 | ambiguous | 0.373 | ambiguous | -0.542 | Destabilizing | 0.565 | D | 0.479 | neutral | N | 0.47333645 | None | None | N |
K/V | 0.6865 | likely_pathogenic | 0.7036 | pathogenic | 0.132 | Stabilizing | 0.923 | D | 0.613 | neutral | None | None | None | None | N |
K/W | 0.9487 | likely_pathogenic | 0.9532 | pathogenic | -0.291 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.8756 | likely_pathogenic | 0.8889 | pathogenic | 0.04 | Stabilizing | 0.987 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.