Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35629 | 107110;107111;107112 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
N2AB | 33988 | 102187;102188;102189 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
N2A | 33061 | 99406;99407;99408 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
N2B | 26564 | 79915;79916;79917 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
Novex-1 | 26689 | 80290;80291;80292 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
Novex-2 | 26756 | 80491;80492;80493 | chr2:178528866;178528865;178528864 | chr2:179393593;179393592;179393591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs781094190 | -0.062 | 0.001 | N | 0.108 | 0.078 | 0.0986583533028 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 8.86E-06 | 0 |
N/S | rs781094190 | -0.062 | 0.001 | N | 0.108 | 0.078 | 0.0986583533028 | gnomAD-4.0.0 | 9.57799E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69819E-06 | 1.27524E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2951 | likely_benign | 0.2922 | benign | -0.345 | Destabilizing | 0.116 | N | 0.495 | neutral | None | None | None | None | N |
N/C | 0.5342 | ambiguous | 0.5321 | ambiguous | 0.436 | Stabilizing | 0.944 | D | 0.6 | neutral | None | None | None | None | N |
N/D | 0.1983 | likely_benign | 0.1927 | benign | -0.062 | Destabilizing | 0.324 | N | 0.396 | neutral | N | 0.473683167 | None | None | N |
N/E | 0.5465 | ambiguous | 0.519 | ambiguous | -0.105 | Destabilizing | 0.241 | N | 0.383 | neutral | None | None | None | None | N |
N/F | 0.7471 | likely_pathogenic | 0.7488 | pathogenic | -0.768 | Destabilizing | 0.818 | D | 0.629 | neutral | None | None | None | None | N |
N/G | 0.3703 | ambiguous | 0.374 | ambiguous | -0.507 | Destabilizing | 0.116 | N | 0.405 | neutral | None | None | None | None | N |
N/H | 0.1758 | likely_benign | 0.1644 | benign | -0.593 | Destabilizing | 0.773 | D | 0.515 | neutral | N | 0.4743766 | None | None | N |
N/I | 0.3601 | ambiguous | 0.3578 | ambiguous | -0.006 | Destabilizing | 0.627 | D | 0.613 | neutral | N | 0.474723317 | None | None | N |
N/K | 0.4186 | ambiguous | 0.4011 | ambiguous | 0.148 | Stabilizing | 0.09 | N | 0.409 | neutral | N | 0.4722963 | None | None | N |
N/L | 0.4353 | ambiguous | 0.4342 | ambiguous | -0.006 | Destabilizing | 0.241 | N | 0.58 | neutral | None | None | None | None | N |
N/M | 0.5444 | ambiguous | 0.5427 | ambiguous | 0.481 | Stabilizing | 0.818 | D | 0.584 | neutral | None | None | None | None | N |
N/P | 0.7301 | likely_pathogenic | 0.7523 | pathogenic | -0.093 | Destabilizing | 0.818 | D | 0.596 | neutral | None | None | None | None | N |
N/Q | 0.4962 | ambiguous | 0.4732 | ambiguous | -0.341 | Destabilizing | 0.69 | D | 0.494 | neutral | None | None | None | None | N |
N/R | 0.4573 | ambiguous | 0.442 | ambiguous | 0.242 | Stabilizing | 0.002 | N | 0.273 | neutral | None | None | None | None | N |
N/S | 0.0863 | likely_benign | 0.0893 | benign | -0.058 | Destabilizing | 0.001 | N | 0.108 | neutral | N | 0.454924048 | None | None | N |
N/T | 0.1717 | likely_benign | 0.1708 | benign | 0.035 | Stabilizing | 0.001 | N | 0.125 | neutral | N | 0.471776225 | None | None | N |
N/V | 0.3447 | ambiguous | 0.3349 | benign | -0.093 | Destabilizing | 0.241 | N | 0.607 | neutral | None | None | None | None | N |
N/W | 0.9145 | likely_pathogenic | 0.9125 | pathogenic | -0.753 | Destabilizing | 0.981 | D | 0.644 | neutral | None | None | None | None | N |
N/Y | 0.3158 | likely_benign | 0.3124 | benign | -0.481 | Destabilizing | 0.912 | D | 0.61 | neutral | N | 0.474896675 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.