Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35630 | 107113;107114;107115 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
N2AB | 33989 | 102190;102191;102192 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
N2A | 33062 | 99409;99410;99411 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
N2B | 26565 | 79918;79919;79920 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
Novex-1 | 26690 | 80293;80294;80295 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
Novex-2 | 26757 | 80494;80495;80496 | chr2:178528863;178528862;178528861 | chr2:179393590;179393589;179393588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs754830278 | -0.804 | 0.19 | N | 0.498 | 0.094 | 0.314716216878 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs754830278 | -0.804 | 0.19 | N | 0.498 | 0.094 | 0.314716216878 | gnomAD-4.0.0 | 1.5909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6356 | likely_pathogenic | 0.63 | pathogenic | -1.413 | Destabilizing | 0.775 | D | 0.673 | neutral | None | None | None | None | N |
I/C | 0.9516 | likely_pathogenic | 0.9488 | pathogenic | -1.069 | Destabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | N |
I/D | 0.9659 | likely_pathogenic | 0.9697 | pathogenic | -1.379 | Destabilizing | 0.987 | D | 0.819 | deleterious | None | None | None | None | N |
I/E | 0.9322 | likely_pathogenic | 0.9413 | pathogenic | -1.433 | Destabilizing | 0.961 | D | 0.815 | deleterious | None | None | None | None | N |
I/F | 0.3102 | likely_benign | 0.3377 | benign | -1.443 | Destabilizing | 0.82 | D | 0.701 | prob.neutral | N | 0.487695401 | None | None | N |
I/G | 0.9336 | likely_pathogenic | 0.9345 | pathogenic | -1.65 | Destabilizing | 0.961 | D | 0.803 | deleterious | None | None | None | None | N |
I/H | 0.898 | likely_pathogenic | 0.9114 | pathogenic | -0.955 | Destabilizing | 0.996 | D | 0.822 | deleterious | None | None | None | None | N |
I/K | 0.8315 | likely_pathogenic | 0.8596 | pathogenic | -0.787 | Destabilizing | 0.923 | D | 0.802 | deleterious | None | None | None | None | N |
I/L | 0.2492 | likely_benign | 0.2444 | benign | -0.86 | Destabilizing | 0.003 | N | 0.285 | neutral | N | 0.486828609 | None | None | N |
I/M | 0.2062 | likely_benign | 0.2039 | benign | -0.603 | Destabilizing | 0.19 | N | 0.524 | neutral | N | 0.487868759 | None | None | N |
I/N | 0.7473 | likely_pathogenic | 0.7583 | pathogenic | -0.652 | Destabilizing | 0.949 | D | 0.821 | deleterious | N | 0.488215476 | None | None | N |
I/P | 0.9476 | likely_pathogenic | 0.9582 | pathogenic | -1.014 | Destabilizing | 0.987 | D | 0.82 | deleterious | None | None | None | None | N |
I/Q | 0.8911 | likely_pathogenic | 0.8987 | pathogenic | -0.973 | Destabilizing | 0.961 | D | 0.819 | deleterious | None | None | None | None | N |
I/R | 0.7788 | likely_pathogenic | 0.813 | pathogenic | -0.175 | Destabilizing | 0.923 | D | 0.819 | deleterious | None | None | None | None | N |
I/S | 0.7037 | likely_pathogenic | 0.7127 | pathogenic | -1.161 | Destabilizing | 0.901 | D | 0.787 | deleterious | N | 0.488042117 | None | None | N |
I/T | 0.4622 | ambiguous | 0.4829 | ambiguous | -1.109 | Destabilizing | 0.722 | D | 0.763 | deleterious | N | 0.487001967 | None | None | N |
I/V | 0.132 | likely_benign | 0.1292 | benign | -1.014 | Destabilizing | 0.19 | N | 0.498 | neutral | N | 0.476080393 | None | None | N |
I/W | 0.9542 | likely_pathogenic | 0.9585 | pathogenic | -1.464 | Destabilizing | 0.996 | D | 0.826 | deleterious | None | None | None | None | N |
I/Y | 0.8216 | likely_pathogenic | 0.8451 | pathogenic | -1.161 | Destabilizing | 0.961 | D | 0.774 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.