Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35631 | 107116;107117;107118 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
N2AB | 33990 | 102193;102194;102195 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
N2A | 33063 | 99412;99413;99414 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
N2B | 26566 | 79921;79922;79923 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
Novex-1 | 26691 | 80296;80297;80298 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
Novex-2 | 26758 | 80497;80498;80499 | chr2:178528860;178528859;178528858 | chr2:179393587;179393586;179393585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.549 | N | 0.184 | 0.086 | 0.240491677333 | gnomAD-4.0.0 | 1.36829E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87287E-05 | 0 | 8.99395E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7041 | likely_pathogenic | 0.6824 | pathogenic | -0.776 | Destabilizing | 0.992 | D | 0.311 | neutral | None | None | None | None | N |
A/D | 0.2764 | likely_benign | 0.2613 | benign | -0.396 | Destabilizing | 0.712 | D | 0.365 | neutral | N | 0.468450705 | None | None | N |
A/E | 0.2327 | likely_benign | 0.2205 | benign | -0.552 | Destabilizing | 0.617 | D | 0.354 | neutral | None | None | None | None | N |
A/F | 0.4068 | ambiguous | 0.3781 | ambiguous | -0.905 | Destabilizing | 0.85 | D | 0.361 | neutral | None | None | None | None | N |
A/G | 0.21 | likely_benign | 0.197 | benign | -0.233 | Destabilizing | 0.549 | D | 0.185 | neutral | N | 0.469144139 | None | None | N |
A/H | 0.4867 | ambiguous | 0.4591 | ambiguous | -0.245 | Destabilizing | 0.992 | D | 0.322 | neutral | None | None | None | None | N |
A/I | 0.2663 | likely_benign | 0.2327 | benign | -0.367 | Destabilizing | 0.005 | N | 0.179 | neutral | None | None | None | None | N |
A/K | 0.3739 | ambiguous | 0.3616 | ambiguous | -0.464 | Destabilizing | 0.617 | D | 0.357 | neutral | None | None | None | None | N |
A/L | 0.2063 | likely_benign | 0.1806 | benign | -0.367 | Destabilizing | 0.103 | N | 0.3 | neutral | None | None | None | None | N |
A/M | 0.3052 | likely_benign | 0.2763 | benign | -0.438 | Destabilizing | 0.85 | D | 0.302 | neutral | None | None | None | None | N |
A/N | 0.3012 | likely_benign | 0.2814 | benign | -0.184 | Destabilizing | 0.92 | D | 0.374 | neutral | None | None | None | None | N |
A/P | 0.1596 | likely_benign | 0.1232 | benign | -0.288 | Destabilizing | 0.002 | N | 0.103 | neutral | N | 0.431876616 | None | None | N |
A/Q | 0.3219 | likely_benign | 0.2985 | benign | -0.459 | Destabilizing | 0.92 | D | 0.326 | neutral | None | None | None | None | N |
A/R | 0.3231 | likely_benign | 0.3133 | benign | -0.029 | Destabilizing | 0.92 | D | 0.346 | neutral | None | None | None | None | N |
A/S | 0.1071 | likely_benign | 0.1017 | benign | -0.378 | Destabilizing | 0.549 | D | 0.22 | neutral | N | 0.466717122 | None | None | N |
A/T | 0.102 | likely_benign | 0.0957 | benign | -0.455 | Destabilizing | 0.549 | D | 0.184 | neutral | N | 0.467063839 | None | None | N |
A/V | 0.1402 | likely_benign | 0.1259 | benign | -0.288 | Destabilizing | 0.002 | N | 0.078 | neutral | N | 0.468797422 | None | None | N |
A/W | 0.78 | likely_pathogenic | 0.7465 | pathogenic | -1.013 | Destabilizing | 0.992 | D | 0.409 | neutral | None | None | None | None | N |
A/Y | 0.5587 | ambiguous | 0.531 | ambiguous | -0.672 | Destabilizing | 0.92 | D | 0.358 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.